RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 SYNE4Q8N205 404 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 PROKR1Q8TCW9 393 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 OSBP2Q969R2 916 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 BTBD2Q9BX70 525 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 INCENPQ9NQS7 918 aa5.42□□□□□ -1.54
USP8-216ENST00000561206 COL11A2P13942 1736 aaPredicted RBP5.42□□□□□ -1.54
USP8-216ENST00000561206 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 KLRG2A4D1S0 409 aaPredicted RBP5.41□□□□□ -1.54
USP8-216ENST00000561206 ABHD16AO95870 558 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 NR4A1P22736 598 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 ADCY8P40145 1251 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 RABGGTBP53611 331 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 GPR85P60893 370 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 ARID5AQ03989 594 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 KANK2Q63ZY3 851 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 STYK1Q6J9G0 422 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.41□□□□□ -1.54
USP8-216ENST00000561206 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 ST7Q9NRC1 585 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 Q9UFV3 132 aa5.41□□□□□ -1.54
USP8-216ENST00000561206 IQCA1LA6NCM1 817 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 GRXCR1A8MXD5 290 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 PRODHO43272 600 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 FAM20BO75063 409 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 SOD2P04179 222 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 PABPC1P11940 636 aaKnown RBP5.4□□□□□ -1.54
USP8-216ENST00000561206 TCF3P15923 654 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 PTGS1P23219 599 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 RTKN2Q8IZC4 609 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 SH3RF2Q8TEC5 729 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 GPR87Q9BY21 358 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 ARHGAP28Q9P2N2 729 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
USP8-216ENST00000561206 R3HCC1Q9Y3T6 440 aaKnown RBP5.4□□□□□ -1.54
USP8-216ENST00000561206 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.39□□□□□ -1.55
USP8-216ENST00000561206 A0A1W2PRX2 142 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 KLF4O43474 513 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 ST5P78524 1137 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 SMAD3P84022 425 aaKnown RBP5.39□□□□□ -1.55
USP8-216ENST00000561206 ANKS3Q6ZW76 656 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
USP8-216ENST00000561206 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
USP8-216ENST00000561206 ANKS1AQ92625 1134 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 LPPQ93052 612 aa5.39□□□□□ -1.55
USP8-216ENST00000561206 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
USP8-216ENST00000561206 FAM47E-STBD1D6RA91 191 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 MAFO75444 373 aaPredicted RBP5.38□□□□□ -1.55
USP8-216ENST00000561206 AOAHP28039 575 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 YOD1Q5VVQ6 348 aaPredicted RBP5.38□□□□□ -1.55
USP8-216ENST00000561206 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 IFNL3Q8IZI9 196 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 CD244Q9BZW8 370 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 IPPKQ9H8X2 491 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 BTBD7Q9P203 1132 aa5.38□□□□□ -1.55
USP8-216ENST00000561206 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 BLACEA4D250 179 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 FAM90A27PA6NNH2 459 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 ZNF185O15231 689 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 PTPN1P18031 435 aaKnown RBP5.37□□□□□ -1.55
USP8-216ENST00000561206 ADCY7P51828 1080 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 IFRD2Q12894 506 aaPredicted RBP5.37□□□□□ -1.55
USP8-216ENST00000561206 BTBD8Q5XKL5 378 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 NAIF1Q69YI7 327 aaPredicted RBP5.37□□□□□ -1.55
USP8-216ENST00000561206 OTOP2Q7RTS6 562 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 ALG1Q9BT22 464 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 FRMD4BQ9Y2L6 1034 aa5.37□□□□□ -1.55
USP8-216ENST00000561206 COL3A1P02461 1466 aaPredicted RBP5.37□□□□□ -1.55
USP8-216ENST00000561206 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 MPIG6BO95866 241 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 CD83Q01151 205 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 C1QL3Q5VWW1 255 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 FBXO42Q6P3S6 717 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 KCNV1Q6PIU1 500 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 DPH6Q7L8W6 267 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 NLGN4XQ8N0W4 816 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 LRRC47Q8N1G4 583 aaKnown RBP5.36□□□□□ -1.55
USP8-216ENST00000561206 FAM98AQ8NCA5 519 aaKnown RBP5.36□□□□□ -1.55
USP8-216ENST00000561206 SCARB1Q8WTV0 552 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 NELL1Q92832 810 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 C16orf92Q96LL3 132 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 GMLQ99445 158 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 SRPK3Q9UPE1 567 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 ASXL2Q76L83 1435 aa5.36□□□□□ -1.55
USP8-216ENST00000561206 GOLGA6L6A8MZA4 724 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 WNT9AO14904 365 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 ELAVL1Q15717 326 aaKnown RBP5.35□□□□□ -1.55
USP8-216ENST00000561206 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 Q6YL49 198 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 ZNF669Q96BR6 464 aaPredicted RBP5.35□□□□□ -1.55
USP8-216ENST00000561206 NBPF4Q96M43 638 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 MNTQ99583 582 aa5.35□□□□□ -1.55
USP8-216ENST00000561206 TYRP1P17643 537 aa5.34□□□□□ -1.55
USP8-216ENST00000561206 ECE1P42892 770 aa5.34□□□□□ -1.55
USP8-216ENST00000561206 HERVK_113P62684 666 aa5.34□□□□□ -1.55
USP8-216ENST00000561206 ADAM8P78325 824 aa5.34□□□□□ -1.55
USP8-216ENST00000561206 RAB33AQ14088 237 aa5.34□□□□□ -1.55
USP8-216ENST00000561206 GRAMD4Q6IC98 578 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms