RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 NONOQ15233 471 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMAD3-215ENST00000560424 KIAA0319Q5VV43 1072 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 C12orf76Q8N812 135 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-215ENST00000560424 MAP4K1Q92918 833 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 SECISBP2LQ93073 1101 aaKnown RBP10.61□□□□□ -0.71
SMAD3-215ENST00000560424 ZBTB10Q96DT7 871 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 CHAMP1Q96JM3 812 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 PIGSQ96S52 555 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 TMX1Q9H3N1 280 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 CWH43Q9H720 699 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 RGS18Q9NS28 235 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 SPG21Q9NZD8 308 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 PKD2L1Q9P0L9 805 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 NCDNQ9UBB6 729 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
SMAD3-215ENST00000560424 FRMPD4Q14CM0 1322 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 KDM3AQ9Y4C1 1321 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 KINO60870 393 aaKnown RBP10.6□□□□□ -0.71
SMAD3-215ENST00000560424 CLASP2O75122 1294 aaKnown RBP10.6□□□□□ -0.71
SMAD3-215ENST00000560424 PBX3P40426 434 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 RABEP1Q15276 862 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 SPECC1Q5M775 1068 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-215ENST00000560424 CABP7Q86V35 215 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 DCLK2Q8N568 766 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 MRPL43Q8N983 215 aaKnown RBP10.6□□□□□ -0.71
SMAD3-215ENST00000560424 SNX21Q969T3 373 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 GPRASP2Q96D09 838 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 MTMR8Q96EF0 704 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 KRT23Q9C075 422 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 ST3GAL5Q9UNP4 418 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 NCOR2Q9Y618 2525 aa10.6□□□□□ -0.71
SMAD3-215ENST00000560424 CACNA1GO43497 2377 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 EPG5Q9HCE0 2579 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 PNMA6FA0A0J9YX94 578 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 SMIM35A0A1B0GVV1 85 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 GSTTP1A0A1W2PQM5 241 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 MGEA5O60502 916 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 CXCL14O95715 111 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 CFHP08603 1231 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 MTMR1Q13613 665 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 GIT2Q14161 759 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TMC5Q6UXY8 1006 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TRAPPC12Q8WVT3 735 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TMEM169Q96HH4 297 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 CNNM2Q9H8M5 875 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 KCNK12Q9HB15 430 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 ZSWIM5Q9P217 1185 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 IGSF9Q9P2J2 1179 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 MAD2L2Q9UI95 211 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
SMAD3-215ENST00000560424 NOC2LQ9Y3T9 749 aaKnown RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
SMAD3-215ENST00000560424 C9IYK1 514 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 ATP9AO75110 1047 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 KCNA2P16389 499 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 ZSCAN20P17040 1043 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-215ENST00000560424 ALDH7A1P49419 539 aaKnown RBP10.58□□□□□ -0.72
SMAD3-215ENST00000560424 BECN1Q14457 450 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 NECTIN1Q15223 517 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 IMMTQ16891 758 aaKnown RBP10.58□□□□□ -0.72
SMAD3-215ENST00000560424 MTHFD1LQ6UB35 978 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 PPFIBP1Q86W92 1011 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 RNF169Q8NCN4 708 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 SFXN1Q9H9B4 322 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 JPH1Q9HDC5 661 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-215ENST00000560424 WNT16Q9UBV4 365 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 ZFHX4Q86UP3 3567 aa10.58□□□□□ -0.72
SMAD3-215ENST00000560424 ERICH2A1L162 156 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 PALM3A6NDB9 673 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-215ENST00000560424 PRR5-ARHGAP8B1AHC4 643 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 SP9P0CG40 484 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 EPCAMP16422 314 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 GBP2P32456 591 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-215ENST00000560424 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMAD3-215ENST00000560424 STAT5BP51692 787 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 ARHGAP8P85298 464 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 VPS52Q8N1B4 723 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 PPP1R16BQ96T49 567 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 SDF4Q9BRK5 362 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 MRPL9Q9BYD2 267 aaKnown RBP10.57□□□□□ -0.72
SMAD3-215ENST00000560424 RIOX1Q9H6W3 641 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 TBC1D17Q9HA65 648 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 SLC9A2Q9UBY0 812 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 SIT1Q9Y3P8 196 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms