RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 CCDC178Q5BJE1 867 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 SPECC1Q5M775 1068 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 VPS53Q5VIR6 699 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 NME8Q8N427 588 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 TMEM87AQ8NBN3 555 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 GLG1Q92896 1179 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 TNPO1Q92973 898 aaKnown RBP11.88□□□□□ -0.51
APH1B-208ENST00000560353 ADAM2Q99965 735 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
APH1B-208ENST00000560353 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 TBC1D17Q9HA65 648 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 TELO2Q9Y4R8 837 aa11.88□□□□□ -0.51
APH1B-208ENST00000560353 KDM3AQ9Y4C1 1321 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 SPTLC1O15269 473 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 CXCL14O95715 111 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 FGAP02671 866 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 DCNP07585 359 aaKnown RBP11.87□□□□□ -0.51
APH1B-208ENST00000560353 CFHP08603 1231 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
APH1B-208ENST00000560353 MARK3P27448 753 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 IGBP1P78318 339 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 KRT76Q01546 638 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 SEMA3FQ13275 785 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 ZNF528Q3MIS6 628 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 KANK3Q6NY19 840 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 ESR2Q92731 530 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 TMEM117Q9H0C3 514 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 DDX19BQ9UMR2 479 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
APH1B-208ENST00000560353 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 C9IYK1 514 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 HOXA2O43364 376 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 NARSO43776 548 aaKnown RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 MGEA5O60502 916 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 FGFR1P11362 822 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 INSRRP14616 1297 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 HOXB1P14653 301 aaPredicted RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 FAM189BP81408 668 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 DMWDQ09019 674 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 TMC5Q6UXY8 1006 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 GPR149Q86SP6 731 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 CABP7Q86V35 215 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 ATRIPQ8WXE1 791 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 ELAC1Q9H777 363 aaKnown RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 SH2B1Q9NRF2 756 aaPredicted RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 CA14Q9ULX7 337 aa11.86□□□□□ -0.51
APH1B-208ENST00000560353 FASNP49327 2511 aaKnown RBP11.86□□□□□ -0.51
APH1B-208ENST00000560353 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 ZBTB5O15062 677 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
APH1B-208ENST00000560353 RPS6KA5O75582 802 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 CA8P35219 290 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 NT5C2P49902 561 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 PPM1JQ5JR12 505 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 LRRC55Q6ZSA7 311 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 IQCA1Q86XH1 822 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 COL26A1Q96A83 441 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 ZBTB10Q96DT7 871 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 SFXN1Q9H9B4 322 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 KAT6AQ92794 2004 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 FRMPD4Q14CM0 1322 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
APH1B-208ENST00000560353 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
APH1B-208ENST00000560353 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 GPR182O15218 404 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 SRFP11831 508 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 EPCAMP16422 314 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 PBX3P40426 434 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 HAND2P61296 217 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 FOXK1P85037 733 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 COL9A3Q14050 684 aaPredicted RBP11.84□□□□□ -0.51
APH1B-208ENST00000560353 GIT2Q14161 759 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 PPFIBP1Q86W92 1011 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 MAML2Q8IZL2 1156 aaPredicted RBP11.84□□□□□ -0.51
APH1B-208ENST00000560353 ABI1Q8IZP0 508 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 SLC39A11Q8N1S5 342 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 SLC44A3Q8N4M1 653 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 SLC22A17Q8WUG5 538 aa11.84□□□□□ -0.51
APH1B-208ENST00000560353 MTMR8Q96EF0 704 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms