RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 WASF1Q92558 559 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 BDP1A6H8Y1 2624 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 ATG2AQ2TAZ0 1938 aa23.06■■□□□ 1.28
CHRNA3-207ENST00000559941 GPR182O15218 404 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 SLC37A4O43826 429 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 LARGE1O95461 756 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 SEC24BO95487 1268 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 TMOD1P28289 359 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 CTNNB1P35222 781 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 KCNQ1P51787 676 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 NEK8Q86SG6 692 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 NECAB1Q8N987 351 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 GTF3C6Q969F1 213 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 OSMRQ99650 979 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 ST3GAL5Q9UNP4 418 aa23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 FNDC1Q4ZHG4 1894 aaPredicted RBP23.05■■□□□ 1.28
CHRNA3-207ENST00000559941 TNFRSF10AO00220 468 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 MGEA5O60502 916 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 FDPSP14324 419 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 GCFC2P16383 781 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 SARSP49591 514 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 NEK4P51957 841 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 TARBP2Q15633 366 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 XKR3Q5GH77 459 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 FAM228AQ86W67 206 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 CMTR2Q8IYT2 770 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 ZNF710Q8N1W2 664 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 OXER1Q8TDS5 423 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 MAP7D2Q96T17 732 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 PPP1R16BQ96T49 567 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 UHRF1Q96T88 793 aaPredicted RBP23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 AKT3Q9Y243 479 aa23.04■■□□□ 1.28
CHRNA3-207ENST00000559941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 TIGD5Q53EQ6 642 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 PIK3AP1Q6ZUJ8 805 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 LRRC71Q8N4P6 559 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 FAM20AQ96MK3 541 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 C11orf84Q9BUA3 381 aaPredicted RBP23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 NIFKQ9BYG3 293 aaKnown RBP23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 KCNMB3Q9NPA1 279 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 RGS18Q9NS28 235 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 C1orf112Q9NSG2 853 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 LRFN2Q9ULH4 789 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 MUC3AQ02505 3323 aa23.03■■□□□ 1.28
CHRNA3-207ENST00000559941 DENND3A2RUS2 1198 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 STBD1O95210 358 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 NLRP11P59045 1033 aaKnown RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 TBC1D8BQ0IIM8 1120 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 BANK1Q8NDB2 785 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 NSUN7Q8NE18 718 aaKnown RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 NAP1L4Q99733 375 aaKnown RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 ADAM2Q99965 735 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 PLVAPQ9BX97 442 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 LMAN2LQ9H0V9 348 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 ADAMTS10Q9H324 1103 aa23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 UBE2ZQ9H832 354 aaPredicted RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 MRPL42Q9Y6G3 142 aaKnown RBP23.02■■□□□ 1.28
CHRNA3-207ENST00000559941 C9IYK1 514 aa23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 CCNT1O60563 726 aaKnown RBP23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 EARS2Q5JPH6 523 aaKnown RBP23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 SLC24A5Q71RS6 500 aa23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 CEP89Q96ST8 783 aa23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 SEPT9Q9UHD8 586 aaPredicted RBP23.01■■□□□ 1.27
CHRNA3-207ENST00000559941 TBX3O15119 743 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 KRT2P35908 639 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 GPC3P51654 580 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 PSMC5P62195 406 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 PPP2R5CQ13362 524 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 DSC3Q14574 896 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 MTERF2Q49AM1 385 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 P2RX5Q93086 422 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 NSUN3Q9H649 340 aaKnown RBP23■■□□□ 1.27
CHRNA3-207ENST00000559941 VAV3Q9UKW4 847 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 PCDHB7Q9Y5E2 793 aa23■■□□□ 1.27
CHRNA3-207ENST00000559941 IGKV6-21A0A0C4DH24 114 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 EML1O00423 815 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 GRM6O15303 877 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 EIF4BP23588 611 aaKnown RBP22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 FAM189BP81408 668 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 NR5A1Q13285 461 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 PAN2Q504Q3 1202 aaKnown RBP22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 NAALADL2Q58DX5 795 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 TCEAL5Q5H9L2 206 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 HAS1Q92839 578 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 TNFRSF25Q93038 417 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 BRMS1Q9HCU9 246 aa22.99■■□□□ 1.27
CHRNA3-207ENST00000559941 TMEM150BA6NC51 233 aa22.98■■□□□ 1.27
CHRNA3-207ENST00000559941 DDX11L8A8MPP1 907 aa22.98■■□□□ 1.27
CHRNA3-207ENST00000559941 IBSPP21815 317 aaPredicted RBP22.98■■□□□ 1.27
CHRNA3-207ENST00000559941 GATMP50440 423 aa22.98■■□□□ 1.27
CHRNA3-207ENST00000559941 NECAB3Q96P71 396 aaPredicted RBP22.98■■□□□ 1.27
CHRNA3-207ENST00000559941 FAM205CA6NFA0 338 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 JAK2O60674 1132 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 DKC1O60832 514 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 DARSP14868 501 aaKnown RBP22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 QARSP47897 775 aaKnown RBP22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 CDC42EP1Q00587 391 aa22.97■■□□□ 1.27
CHRNA3-207ENST00000559941 DRP2Q13474 957 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms