RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 HAS1Q92839 578 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 CCDC43Q96MW1 224 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 TGS1Q96RS0 853 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 LXNQ9BS40 222 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 BMP2KQ9NSY1 1161 aaPredicted RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 NOC2LQ9Y3T9 749 aaKnown RBP9.19□□□□□ -0.94
SNX1-207ENST00000559401 SQORQ9Y6N5 450 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 KDM3AQ9Y4C1 1321 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 RALGAPA2Q2PPJ7 1873 aa9.19□□□□□ -0.94
SNX1-207ENST00000559401 WNT7AO00755 349 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 ENPP3O14638 875 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 GPR182O15218 404 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 P4HBP07237 508 aaKnown RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 STAG3L1P0CL83 205 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 CRYBB1P53674 252 aaPredicted RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 POLGP54098 1239 aaPredicted RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 GRB10Q13322 594 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 CTTNQ14247 550 aaKnown RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 EPHA7Q15375 998 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 MCTP1Q6DN14 999 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 TPH2Q8IWU9 490 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 FIBCD1Q8N539 461 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 FBXO22Q8NEZ5 403 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 FBXO18Q8NFZ0 1043 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 TMEM40Q8WWA1 233 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 LINC01599Q8WXQ3 324 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 SLC7A3Q8WY07 619 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 DYDC2Q96IM9 177 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 TMX3Q96JJ7 454 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 CEP170P1Q96L14 293 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 C17orf80Q9BSJ5 609 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 TTC12Q9H892 705 aaPredicted RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 RGL1Q9NZL6 768 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
SNX1-207ENST00000559401 PCDHA12Q9UN75 941 aa9.18□□□□□ -0.94
SNX1-207ENST00000559401 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ADGRA3Q8IWK6 1321 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 H3BQV1 296 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 CTNNB1P35222 781 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 MCM2P49736 904 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 GPC3P51654 580 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 NPEPPSP55786 919 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ERVK-21P61565 698 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 DRP2Q13474 957 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 BTG3Q14201 252 aaPredicted RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 TARBP2Q15633 366 aaKnown RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 ZNF174Q15697 407 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 PAN2Q504Q3 1202 aaKnown RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 XKR9Q5GH70 373 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ANO5Q75V66 913 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 OTUD6AQ7L8S5 288 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 FAM228AQ86W67 206 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 RHPN2Q8IUC4 686 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 NPAS4Q8IUM7 802 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 NOSTRINQ8IVI9 506 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 NLRP4Q96MN2 994 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ADAM2Q99965 735 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 EIF2AK1Q9BQI3 630 aaKnown RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 JPH2Q9BR39 696 aaPredicted RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 FOXP1Q9H334 677 aaPredicted RBP9.17□□□□□ -0.94
SNX1-207ENST00000559401 ZSWIM4Q9H7M6 989 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 CYP26B1Q9NR63 512 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 ST3GAL5Q9UNP4 418 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 TTC3P53804 2025 aa9.17□□□□□ -0.94
SNX1-207ENST00000559401 COL4A6Q14031 1691 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 A0A087WZ62 844 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 POTEMA6NI47 508 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 MGEA5O60502 916 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 GPR32O75388 356 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 STBD1O95210 358 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 OR52Z1P0C646 297 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 ZSCAN20P17040 1043 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 FGFR4P22455 802 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 GJB2P29033 226 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 YWHABP31946 246 aaKnown RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 RFC5P40937 340 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 SARSP49591 514 aaKnown RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 SPIRE1Q08AE8 756 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 EPC2Q52LR7 807 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 SPOUT1Q5T280 376 aaKnown RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 RTN4RL1Q86UN2 441 aaPredicted RBP9.16□□□□□ -0.94
SNX1-207ENST00000559401 C4orf19Q8IY42 314 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 LINC01465Q8N7H1 131 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 NEK9Q8TD19 979 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 SAMD11Q96NU1 681 aa9.16□□□□□ -0.94
SNX1-207ENST00000559401 FDXACB1Q9BRP7 624 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms