RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
RPL28-207ENST00000558815 NEMFO60524 1076 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 PSMC5P62195 406 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 CYP4A11Q02928 519 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 GRB10Q13322 594 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 C17orf80Q9BSJ5 609 aa17.18■□□□□ 0.34
RPL28-207ENST00000558815 STBD1O95210 358 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 MCM7P33993 719 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 TXKP42681 527 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
RPL28-207ENST00000558815 CRYBB1P53674 252 aaPredicted RBP17.17■□□□□ 0.34
RPL28-207ENST00000558815 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
RPL28-207ENST00000558815 ERVK-21P61565 698 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 DRP2Q13474 957 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
RPL28-207ENST00000558815 DYDC2Q96IM9 177 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 FTHL17Q9BXU8 183 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 NIFKQ9BYG3 293 aaKnown RBP17.17■□□□□ 0.34
RPL28-207ENST00000558815 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 PRDM6Q9NQX0 595 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 RGL1Q9NZL6 768 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 ST3GAL5Q9UNP4 418 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
RPL28-207ENST00000558815 DKC1O60832 514 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPL28-207ENST00000558815 GPR32O75388 356 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 CD2BP2O95400 341 aaKnown RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 P4HBP07237 508 aaKnown RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 CTTNQ14247 550 aaKnown RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 EPHA7Q15375 998 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 SKIV2LQ15477 1246 aaKnown RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 TARBP2Q15633 366 aaKnown RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 ANO5Q75V66 913 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 FAM228AQ86W67 206 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 LINC01465Q8N7H1 131 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 SP7Q8TDD2 431 aaPredicted RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 LXNQ9BS40 222 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 WRAP73Q9P2S5 460 aaPredicted RBP17.16■□□□□ 0.34
RPL28-207ENST00000558815 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
RPL28-207ENST00000558815 TTC3P53804 2025 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 DENND3A2RUS2 1198 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 GPR182O15218 404 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 MGEA5O60502 916 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 GPC3P51654 580 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 NPEPPSP55786 919 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 PAN2Q504Q3 1202 aaKnown RBP17.15■□□□□ 0.34
RPL28-207ENST00000558815 TPH2Q8IWU9 490 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 FBXO18Q8NFZ0 1043 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 NLRP7Q8WX94 980 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 ADAM2Q99965 735 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
RPL28-207ENST00000558815 TMEM60Q9H2L4 133 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 LRFN2Q9ULH4 789 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 RALGAPA2Q2PPJ7 1873 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 ADGRA3Q8IWK6 1321 aa17.15■□□□□ 0.34
RPL28-207ENST00000558815 FGFR4P22455 802 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 BTG3Q14201 252 aaPredicted RBP17.14■□□□□ 0.33
RPL28-207ENST00000558815 ZNF174Q15697 407 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 CEP170P1Q96L14 293 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
RPL28-207ENST00000558815 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
RPL28-207ENST00000558815 CYP26B1Q9NR63 512 aa17.14■□□□□ 0.33
RPL28-207ENST00000558815 PRUNE2Q8WUY3 3088 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 POTEMA6NI47 508 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 LPXNO60711 386 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 YWHABP31946 246 aaKnown RBP17.13■□□□□ 0.33
RPL28-207ENST00000558815 CTNNB1P35222 781 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 GATMP50440 423 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 DNM2P50570 870 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 POLGP54098 1239 aaPredicted RBP17.13■□□□□ 0.33
RPL28-207ENST00000558815 EPC2Q52LR7 807 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 XKR9Q5GH70 373 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
RPL28-207ENST00000558815 CEP89Q96ST8 783 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 ADAMTS10Q9H324 1103 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 ZSWIM4Q9H7M6 989 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
RPL28-207ENST00000558815 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
RPL28-207ENST00000558815 ZBTB39O15060 712 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 MAFO75444 373 aaPredicted RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 CSDE1O75534 798 aaKnown RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 DGKIO75912 1065 aa17.12■□□□□ 0.33
RPL28-207ENST00000558815 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
RPL28-207ENST00000558815 NBR1Q14596 966 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms