RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 ZNF174Q15697 407 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 ANO5Q75V66 913 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 SPRED2Q7Z698 418 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 NME8Q8N427 588 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 LINC01465Q8N7H1 131 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 TMEM40Q8WWA1 233 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 LINC01599Q8WXQ3 324 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 ZNF668Q96K58 619 aaPredicted RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 OSMRQ99650 979 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 CERS4Q9HA82 394 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
PBX1-213ENST00000558796 PCDHA12Q9UN75 941 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
PBX1-213ENST00000558796 OR52Z1P0C646 297 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 FOSL2P15408 326 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.43
PBX1-213ENST00000558796 NPEPPSP55786 919 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 TAP1Q03518 808 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 DRP2Q13474 957 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 EPHA7Q15375 998 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 CEP89Q96ST8 783 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 EIF2AK1Q9BQI3 630 aaKnown RBP12.34□□□□□ -0.43
PBX1-213ENST00000558796 BMP2KQ9NSY1 1161 aaPredicted RBP12.34□□□□□ -0.43
PBX1-213ENST00000558796 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
PBX1-213ENST00000558796 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
PBX1-213ENST00000558796 H3BQV1 296 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 ZBTB39O15060 712 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 GPR32O75388 356 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
PBX1-213ENST00000558796 TMOD1P28289 359 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 NLRP11P59045 1033 aaKnown RBP12.33□□□□□ -0.44
PBX1-213ENST00000558796 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
PBX1-213ENST00000558796 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
PBX1-213ENST00000558796 USP38Q8NB14 1042 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 CEP170P1Q96L14 293 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 RAD9AQ99638 391 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 TMX1Q9H3N1 280 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 CYP26B1Q9NR63 512 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
PBX1-213ENST00000558796 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
PBX1-213ENST00000558796 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 EPOPA6NHQ4 379 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
PBX1-213ENST00000558796 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
PBX1-213ENST00000558796 TECP42680 631 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 TOB1P50616 345 aaPredicted RBP12.32□□□□□ -0.44
PBX1-213ENST00000558796 CRYBB1P53674 252 aaPredicted RBP12.32□□□□□ -0.44
PBX1-213ENST00000558796 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 MAFAQ8NHW3 353 aaPredicted RBP12.32□□□□□ -0.44
PBX1-213ENST00000558796 NLRP7Q8WX94 980 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 YME1L1Q96TA2 773 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
PBX1-213ENST00000558796 ADAMTS10Q9H324 1103 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 ERVK-5Q9HDB9 667 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
PBX1-213ENST00000558796 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 IGKV6-21A0A0C4DH24 114 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 RFXAPO00287 272 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 ENPP3O14638 875 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 MGEA5O60502 916 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 SLITRK3O94933 977 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 GPC3P51654 580 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 CUL4AQ13619 759 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 ADGRE1Q14246 886 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 RTN4RL1Q86UN2 441 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 NEK9Q8TD19 979 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
PBX1-213ENST00000558796 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 ST3GAL5Q9UNP4 418 aa12.31□□□□□ -0.44
PBX1-213ENST00000558796 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms