RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 POLGP54098 1239 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-205ENST00000558428 IKBKEQ14164 716 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 LPIN1Q14693 890 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 PLEKHG4Q58EX7 1191 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 RASIP1Q5U651 963 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
SMAD3-205ENST00000558428 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 SLC7A3Q8WY07 619 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 SEPT8Q92599 483 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 IFIH1Q9BYX4 1025 aaKnown RBP13.8□□□□□ -0.2
SMAD3-205ENST00000558428 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-205ENST00000558428 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 CLIC4Q9Y696 253 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 SLC4A7Q9Y6M7 1214 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 KDM3AQ9Y4C1 1321 aa13.8□□□□□ -0.2
SMAD3-205ENST00000558428 IGKV6-21A0A0C4DH24 114 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 PP2D1A8MPX8 630 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 SOX1O00570 391 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 CDC25AP30304 524 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 RFC5P40937 340 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 KCNJ6P48051 423 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 DNM2P50570 870 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 FXR1P51114 621 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 DRP2Q13474 957 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 KIZQ2M2Z5 673 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 TSHZ1Q6ZSZ6 1077 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 EXOC8Q8IYI6 725 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 APBB2Q92870 758 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 NACC1Q96RE7 527 aa13.79□□□□□ -0.2
SMAD3-205ENST00000558428 DHX33Q9H6R0 707 aaKnown RBP13.79□□□□□ -0.2
SMAD3-205ENST00000558428 GBF1Q92538 1859 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 MYO9BQ13459 2157 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 EFCAB14O75071 495 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 GPR32O75388 356 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 F13A1P00488 732 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 MUTP22033 750 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 RARRES1P49788 294 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 PKP1Q13835 747 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 EMC2Q15006 297 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 ECM1Q16610 540 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 LRCH3Q96II8 777 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 ZNF668Q96K58 619 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 USP28Q96RU2 1077 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 OSMRQ99650 979 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 SUCLA2Q9P2R7 463 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-205ENST00000558428 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 SQORQ9Y6N5 450 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
SMAD3-205ENST00000558428 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 GAS2O43903 313 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 DGAT1O75907 488 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 CD52P31358 61 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 GPC3P51654 580 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 WDR5P61964 334 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 SMAD3P84022 425 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 PAK2Q13177 524 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 PTPAQ15257 358 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 RHPN2Q8IUC4 686 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ZNF396Q96N95 335 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 SLC9A7Q96T83 725 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 MTRQ99707 1265 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
SMAD3-205ENST00000558428 DDX19AQ9NUU7 478 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.21
SMAD3-205ENST00000558428 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
SMAD3-205ENST00000558428 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
SMAD3-205ENST00000558428 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
SMAD3-205ENST00000558428 DEFB103AP81534 67 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms