RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PCDHA8Q9Y5H6 950 aa12.15□□□□□ -0.46
PCAT29-201ENST00000558411 TCP11X1B4DZS4 312 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 TPBGLP0DKB5 382 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 RAD23BP54727 409 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 SLC29A2Q14542 456 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ZCWPW2Q504Y3 356 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ESCO1Q5FWF5 840 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 WASHC2DQ5SRD0 308 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 DAAM2Q86T65 1068 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ASAP3Q8TDY4 903 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 DYDC1Q8WWB3 177 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 INPP5DQ92835 1189 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 HPS3Q969F9 1004 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 LRRC27Q9C0I9 530 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 CHCHD3Q9NX63 227 aaKnown RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 NAGPAQ9UK23 515 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 RASGRF2O14827 1237 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 LMNAP02545 664 aaKnown RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ATP5DP30049 168 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ORC2Q13416 577 aaPredicted RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 AUHQ13825 339 aaKnown RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 TMEM154Q6P9G4 183 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 CKAP2Q8WWK9 683 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 KIFAP3Q92845 792 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 RBM41Q96IZ5 413 aaKnown RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 RUNDC3BQ96NL0 473 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 KLHL14Q9P2G3 628 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 MTRF1LQ9UGC7 380 aaKnown RBP12.14□□□□□ -0.47
PCAT29-201ENST00000558411 GGT7Q9UJ14 662 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
PCAT29-201ENST00000558411 EYA4O95677 639 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 PRKCIP41743 596 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 TUBP50607 506 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 PTK2Q05397 1052 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 SF3A3Q12874 501 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 HLFQ16534 295 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 INF2Q27J81 1249 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 OR52E8Q6IFG1 317 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 ATL2Q8NHH9 583 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 ETNK1Q9HBU6 452 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 MYMKA6NI61 221 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 KIAA0391O15091 583 aaKnown RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 FGGP02679 453 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 LRRC23Q53EV4 343 aaPredicted RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 ALKBH5Q6P6C2 394 aaKnown RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 EXOC3L1Q86VI1 746 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 FAM136AQ96C01 138 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
PCAT29-201ENST00000558411 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 FAM192AQ9GZU8 254 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
PCAT29-201ENST00000558411 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 RIPK2O43353 540 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 RARGP13631 454 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 PLTPP55058 493 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 ARID5AQ03989 594 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 JAMLQ86YT9 394 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
PCAT29-201ENST00000558411 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 CARD9Q9H257 536 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 BLOC1S4Q9NUP1 217 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
PCAT29-201ENST00000558411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCAT29-201ENST00000558411 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
PCAT29-201ENST00000558411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms