RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 JAK2O60674 1132 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 FDPSP14324 419 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 KRT2P35908 639 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 CRYBB1P53674 252 aaPredicted RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 TBC1D8BQ0IIM8 1120 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 NR5A1Q13285 461 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 EARS2Q5JPH6 523 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 FAM228AQ86W67 206 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 RDM1Q8NG50 284 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 MRPL38Q96DV4 380 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 UHRF1Q96T88 793 aaPredicted RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 ADAM2Q99965 735 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 COG5Q9UP83 839 aa13.42□□□□□ -0.26
HERC1-202ENST00000558324 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
HERC1-202ENST00000558324 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 TRANK1O15050 2925 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 EML1O00423 815 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 GPR182O15218 404 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 MARCH6O60337 910 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 GPR32O75388 356 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 LINC00271P0C7V0 271 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 STAG3L1P0CL83 205 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 TMOD1P28289 359 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 BMPR1AP36894 532 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 ZNF689Q96CS4 500 aaPredicted RBP13.41□□□□□ -0.26
HERC1-202ENST00000558324 C11orf84Q9BUA3 381 aaPredicted RBP13.41□□□□□ -0.26
HERC1-202ENST00000558324 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
HERC1-202ENST00000558324 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.26
HERC1-202ENST00000558324 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 TNFRSF10AO00220 468 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 GRM6O15303 877 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 BMP1P13497 986 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
HERC1-202ENST00000558324 SARSP49591 514 aaKnown RBP13.4□□□□□ -0.26
HERC1-202ENST00000558324 ST3GAL1Q11201 340 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 DRP2Q13474 957 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 XKR3Q5GH77 459 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 ODR4Q5SWX8 454 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 PLA2G4FQ68DD2 849 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
HERC1-202ENST00000558324 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 LINC01465Q8N7H1 131 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 UBE2ZQ9H832 354 aaPredicted RBP13.4□□□□□ -0.26
HERC1-202ENST00000558324 KCNMB3Q9NPA1 279 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 VAV3Q9UKW4 847 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
HERC1-202ENST00000558324 C5orf67F2Z3F1 127 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 STBD1O95210 358 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 FGFR4P22455 802 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 KCNA5P22460 613 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 GPC3P51654 580 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 PSMC5P62195 406 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 PPP2R5CQ13362 524 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 TRIM29Q14134 588 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 TARBP2Q15633 366 aaKnown RBP13.39□□□□□ -0.27
HERC1-202ENST00000558324 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 SLC24A5Q71RS6 500 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
HERC1-202ENST00000558324 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 NIFKQ9BYG3 293 aaKnown RBP13.39□□□□□ -0.27
HERC1-202ENST00000558324 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
HERC1-202ENST00000558324 RGS18Q9NS28 235 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 C1orf112Q9NSG2 853 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 TTC3P53804 2025 aa13.39□□□□□ -0.27
HERC1-202ENST00000558324 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 BTBD18B2RXH4 712 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 C9IYK1 514 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 MMP1P03956 469 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 RB1P06400 928 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 FGFR1P11362 822 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 EIF4BP23588 611 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 SPOUT1Q5T280 376 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 ANO5Q75V66 913 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 DIS3L2Q8IYB7 885 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 HAS1Q92839 578 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 TNFRSF25Q93038 417 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 NAP1L4Q99733 375 aaKnown RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms