RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 TRAF7Q6Q0C0 670 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 ABHD15Q6UXT9 468 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 VWCEQ96DN2 955 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 FTHL17Q9BXU8 183 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
LINC00648-204ENST00000557749 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 PCDHA2Q9Y5H9 948 aa12.9□□□□□ -0.34
LINC00648-204ENST00000557749 SMIM35A0A1B0GVV1 85 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00648-204ENST00000557749 GAS7O60861 476 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 LILRB3O75022 631 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 CA3P07451 260 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 CTSHP09668 335 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 MRPS6P82932 125 aaKnown RBP12.89□□□□□ -0.35
LINC00648-204ENST00000557749 TRIM29Q14134 588 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 PLCB4Q15147 1175 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 Q4G0T1 1027 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 TBCKQ8TEA7 893 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 WNT8BQ93098 351 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 SAMD11Q96NU1 681 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 TEKT3Q9BXF9 490 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
LINC00648-204ENST00000557749 YBX2Q9Y2T7 364 aaKnown RBP12.89□□□□□ -0.35
LINC00648-204ENST00000557749 TET1Q8NFU7 2136 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 DDX39AO00148 427 aaKnown RBP12.88□□□□□ -0.35
LINC00648-204ENST00000557749 MAGEB2O15479 319 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 DHX15O43143 795 aaKnown RBP12.88□□□□□ -0.35
LINC00648-204ENST00000557749 CYP3A7P24462 503 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 TMOD1P28289 359 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 NEK4P51957 841 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 RABGGTBP53611 331 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 AK2P54819 239 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 IGBP1P78318 339 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 GPNMBQ14956 572 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 LRCH2Q5VUJ6 765 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00648-204ENST00000557749 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 PCYT2Q99447 389 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
LINC00648-204ENST00000557749 NRBP2Q9NSY0 501 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
LINC00648-204ENST00000557749 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 RWDD3Q9Y3V2 267 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 KDM3AQ9Y4C1 1321 aa12.88□□□□□ -0.35
LINC00648-204ENST00000557749 LAMA2P24043 3122 aaKnown RBP12.87□□□□□ -0.35
LINC00648-204ENST00000557749 CCNE2O96020 404 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 PPP4R3AQ6IN85 833 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 NEK8Q86SG6 692 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 CCDC60Q8IWA6 550 aaPredicted RBP12.87□□□□□ -0.35
LINC00648-204ENST00000557749 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 RASGRP4Q8TDF6 673 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 TGS1Q96RS0 853 aaKnown RBP12.87□□□□□ -0.35
LINC00648-204ENST00000557749 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
LINC00648-204ENST00000557749 PHF20Q9BVI0 1012 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 DISC1Q9NRI5 854 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
LINC00648-204ENST00000557749 TRPV2Q9Y5S1 764 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 MYO9BQ13459 2157 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
LINC00648-204ENST00000557749 TBX3O15119 743 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MSH4O15457 936 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 S1PR4O95977 384 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 POU3F3P20264 500 aaPredicted RBP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 IGFBP4P22692 258 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MGAT3Q09327 533 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 FBXO47Q5MNV8 452 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MTHFD1LQ6UB35 978 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 LENG9Q96B70 501 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 YME1L1Q96TA2 773 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
LINC00648-204ENST00000557749 GBF1Q92538 1859 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
LINC00648-204ENST00000557749 M0R2N6 131 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 MARCH6O60337 910 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
LINC00648-204ENST00000557749 CHRNA1P02708 482 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms