RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
CHD8-214ENST00000557727 TBX21Q9UL17 535 aa10.13□□□□□ -0.79
CHD8-214ENST00000557727 PTPRSQ13332 1948 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 ZBTB39O15060 712 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 LYPLA2O95372 231 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 BAG4O95429 457 aaKnown RBP10.12□□□□□ -0.79
CHD8-214ENST00000557727 CDC25AP30304 524 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 PDIA5Q14554 519 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 TRIM71Q2Q1W2 868 aaKnown RBP10.12□□□□□ -0.79
CHD8-214ENST00000557727 NCAPH2Q6IBW4 605 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 ANO5Q75V66 913 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 CATSPER3Q86XQ3 398 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 LINC01465Q8N7H1 131 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 GLG1Q92896 1179 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 ZBTB10Q96DT7 871 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 DYDC2Q96IM9 177 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 LXNQ9BS40 222 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 NIFKQ9BYG3 293 aaKnown RBP10.12□□□□□ -0.79
CHD8-214ENST00000557727 SEZ6LQ9BYH1 1024 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 PDLIM7Q9NR12 457 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 SETD4Q9NVD3 440 aa10.12□□□□□ -0.79
CHD8-214ENST00000557727 TFIP11Q9UBB9 837 aaKnown RBP10.12□□□□□ -0.79
CHD8-214ENST00000557727 ZNF215Q9UL58 517 aaPredicted RBP10.12□□□□□ -0.79
CHD8-214ENST00000557727 VWA3AA6NCI4 1184 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 TRIM43BA6NCK2 446 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 BACH1O14867 736 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 TREHO43280 583 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 PQBP1O60828 265 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 DGAT1O75907 488 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 C22orf31O95567 290 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 YEATS4O95619 227 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 BMP15O95972 392 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 INSRRP14616 1297 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 RPA1P27694 616 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 MARCKSP29966 332 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 QARSP47897 775 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 PSMC5P62195 406 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 CEBPZQ03701 1054 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 RBL2Q08999 1139 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 GRIK4Q16099 956 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 FOXD4L6Q3SYB3 417 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 HYIQ5T013 277 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 AXDND1Q5T1B0 1012 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 FAM160B1Q5W0V3 765 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 FOXD4L3Q6VB84 417 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 RUFY4Q6ZNE9 571 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 USP49Q70CQ1 688 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 KCNK18Q7Z418 384 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 SERINC5Q86VE9 423 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 TRIM43Q96BQ3 446 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 CLIC6Q96NY7 704 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 PNMA5Q96PV4 448 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 AZI2Q9H6S1 392 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 RCOR1Q9UKL0 485 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 ATP11BQ9Y2G3 1177 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 SAMM50Q9Y512 469 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 SRPRBQ9Y5M8 271 aaKnown RBP10.11□□□□□ -0.79
CHD8-214ENST00000557727 COL1A2P08123 1366 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 MICAL3Q7RTP6 2002 aa10.11□□□□□ -0.79
CHD8-214ENST00000557727 UMODL1Q5DID0 1318 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 MROH7Q68CQ1 1323 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 A0A087WWV3 80 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 IGKV6-21A0A0C4DH24 114 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 KIAA0355O15063 1070 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 HBP1O60381 514 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 CYP2C9P11712 490 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 NUCB2P80303 420 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 PPFIA1Q13136 1202 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 PLA2G4FQ68DD2 849 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 C7orf31Q8N865 590 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 NEK9Q8TD19 979 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 ATP6V0A1Q93050 837 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 VTI1AQ96AJ9 217 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 IPO9Q96P70 1041 aaKnown RBP10.1□□□□□ -0.79
CHD8-214ENST00000557727 SH2D3AQ9BRG2 576 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 HTATIP2Q9BUP3 242 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 NOC4LQ9BVI4 516 aaKnown RBP10.1□□□□□ -0.79
CHD8-214ENST00000557727 CSRNP2Q9H175 543 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 TUFT1Q9NNX1 390 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
CHD8-214ENST00000557727 LRWD1Q9UFC0 647 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 TRIOBPQ9H2D6 2365 aa10.1□□□□□ -0.79
CHD8-214ENST00000557727 C17orf102A2RUQ5 167 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 SPTLC2O15270 562 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 MARCH6O60337 910 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 PPP6R2O75170 966 aa10.09□□□□□ -0.79
CHD8-214ENST00000557727 CLTBP09497 229 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms