RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 KRT76Q01546 638 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 ITGB3BPQ13352 177 aaPredicted RBP18.8■□□□□ 0.6
NEK9-211ENST00000557673 NPY5RQ15761 445 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 KLHL23Q8NBE8 558 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 CRYGNQ8WXF5 182 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 EDAQ92838 391 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 SNX21Q969T3 373 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 MSLNLQ96KJ4 702 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 PCYT2Q99447 389 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 AGO4Q9HCK5 861 aaKnown RBP18.8■□□□□ 0.6
NEK9-211ENST00000557673 AAASQ9NRG9 546 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 PCDHB12Q9Y5F1 795 aa18.8■□□□□ 0.6
NEK9-211ENST00000557673 FAM86B1E9PN63 330 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 K7ELQ4 463 aaPredicted RBP18.79■□□□□ 0.6
NEK9-211ENST00000557673 LINC01565O15544 149 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 FAM86B2P0C5J1 330 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 GNA11P29992 359 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 UBE3AQ05086 875 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 COASYQ13057 564 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 CUL4AQ13619 759 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 PLCB4Q15147 1175 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
NEK9-211ENST00000557673 DAGLBQ8NCG7 672 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 SMRP1Q8NCR6 262 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 POF1BQ8WVV4 589 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 PHF20Q9BVI0 1012 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 PCDHB7Q9Y5E2 793 aa18.79■□□□□ 0.6
NEK9-211ENST00000557673 XBP1P17861 261 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 DNAJB1P25685 340 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 NRIP1P48552 1158 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 SARSP49591 514 aaKnown RBP18.78■□□□□ 0.6
NEK9-211ENST00000557673 NLRP5P59047 1200 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 MTHFD1LQ6UB35 978 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 NIPA1Q7RTP0 329 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 PLA2G4DQ86XP0 818 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 ZBTB10Q96DT7 871 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 PCDHA4Q9UN74 947 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
NEK9-211ENST00000557673 IGLV3-22A0A075B6J6 115 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 DENND3A2RUS2 1198 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 DDX39AO00148 427 aaKnown RBP18.77■□□□□ 0.6
NEK9-211ENST00000557673 CYP3A4P08684 503 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 NFX1Q12986 1120 aaKnown RBP18.77■□□□□ 0.6
NEK9-211ENST00000557673 SPOUT1Q5T280 376 aaKnown RBP18.77■□□□□ 0.6
NEK9-211ENST00000557673 FAM160B1Q5W0V3 765 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 GALNT17Q6IS24 598 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 PDE12Q6L8Q7 609 aaKnown RBP18.77■□□□□ 0.6
NEK9-211ENST00000557673 BMP8AQ7Z5Y6 402 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 MICAL1Q8TDZ2 1067 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 PRRX2Q99811 253 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 TLE6Q9H808 572 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 C1orf112Q9NSG2 853 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 CLEC1BQ9P126 229 aa18.77■□□□□ 0.6
NEK9-211ENST00000557673 M0R2N6 131 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 HBP1O60381 514 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 ATG7O95352 703 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 CCNE2O96020 404 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 KLRC1P26715 233 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 FOSBP53539 338 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 RBM23Q86U06 439 aaKnown RBP18.76■□□□□ 0.59
NEK9-211ENST00000557673 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 TRAPPC12Q8WVT3 735 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 CDCA3Q99618 268 aaPredicted RBP18.76■□□□□ 0.59
NEK9-211ENST00000557673 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
NEK9-211ENST00000557673 LOC730098B7Z3J9 87 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 BACH1O14867 736 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 GPR182O15218 404 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 RPS6KA5O75582 802 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 SRGAP2BP0DMP2 458 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 TRIM67Q6ZTA4 783 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 SLC24A5Q71RS6 500 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 BLIDQ8IZY5 108 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 FAM184AQ8NB25 1140 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 ATP8B4Q8TF62 1192 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 PHF7Q9BWX1 381 aaPredicted RBP18.75■□□□□ 0.59
NEK9-211ENST00000557673 TLR9Q9NR96 1032 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 GINS2Q9Y248 185 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
NEK9-211ENST00000557673 C5orf42Q9H799 3197 aa18.75■□□□□ 0.59
NEK9-211ENST00000557673 ATG2AQ2TAZ0 1938 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 COL1A2P08123 1366 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 IPO5O00410 1097 aaKnown RBP18.74■□□□□ 0.59
NEK9-211ENST00000557673 DHX15O43143 795 aaKnown RBP18.74■□□□□ 0.59
NEK9-211ENST00000557673 TRIM29Q14134 588 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 TMEM266Q2M3C6 531 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 PRR16Q569H4 304 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 ZNF484Q5JVG2 852 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 SUGP1Q8IWZ8 645 aaKnown RBP18.74■□□□□ 0.59
NEK9-211ENST00000557673 PBXIP1Q96AQ6 731 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 ERVK-5Q9HDB9 667 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 RGS18Q9NS28 235 aa18.74■□□□□ 0.59
NEK9-211ENST00000557673 USP15Q9Y4E8 981 aaPredicted RBP18.74■□□□□ 0.59
NEK9-211ENST00000557673 TRIOO75962 3097 aa18.73■□□□□ 0.59
NEK9-211ENST00000557673 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
NEK9-211ENST00000557673 TMEM221A6NGB7 291 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms