RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 NR3C2P08235 984 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 ADRB1P08588 477 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 HOXB8P17481 243 aaPredicted RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 MCM4P33991 863 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 UBE3AQ05086 875 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 LAMC2Q13753 1193 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 NCOA4Q13772 614 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 TSGA10IPQ3SY00 556 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 INTS6LQ5JSJ4 861 aaKnown RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 GIMAP6Q6P9H5 292 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 TMEM184AQ6ZMB5 413 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 SKAP1Q86WV1 359 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 CMTR2Q8IYT2 770 aaKnown RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 APOL5Q9BWW9 433 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 OSBPL7Q9BZF2 842 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 RRAGDQ9NQL2 400 aaPredicted RBP7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 PAG1Q9NWQ8 432 aa7.91□□□□□ -1.14
SPTLC2-206ENST00000557566 ZZEF1O43149 2961 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ZFYVE26Q68DK2 2539 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 PRR5-ARHGAP8B1AHC4 643 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 IPO8O15397 1037 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 CAPN5O15484 640 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 PPFIA4O75335 1185 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ZIC2O95409 532 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ASGR2P07307 311 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 XRCC6P12956 609 aaKnown RBP eCLIP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 HOXD8P13378 290 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 NPR3P17342 541 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 GRM5P41594 1212 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 RARSP54136 660 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ARHGAP8P85298 464 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 DMWDQ09019 674 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 STXBP2Q15833 593 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 CCDC96Q2M329 555 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 SKOR2Q2VWA4 1001 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 EML3Q32P44 896 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 PDE12Q6L8Q7 609 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ZSCAN25Q6NSZ9 544 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 CES5AQ6NT32 575 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 SYCE2Q6PIF2 218 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 ZDHHC14Q8IZN3 488 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 TDRD5Q8NAT2 981 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 CLEC4DQ8WXI8 215 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 RTKNQ9BST9 563 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 PUS7LQ9H0K6 701 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 SH2B1Q9NRF2 756 aaPredicted RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 DDX41Q9UJV9 622 aaKnown RBP7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 STX8Q9UNK0 236 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 MRVI1Q9Y6F6 885 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 FRYQ5TBA9 3013 aa7.9□□□□□ -1.14
SPTLC2-206ENST00000557566 GSG1L2A8MUP6 293 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 ENPP3O14638 875 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 TREHO43280 583 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 TPM2P07951 284 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 GNAT1P11488 350 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 TRIM27P14373 513 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 HOXC8P31273 242 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 SLC16A2P36021 539 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 TDO2P48775 406 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 TERF1P54274 439 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 INSM1Q01101 510 aaPredicted RBP7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 LMNB2Q03252 620 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 ITIH3Q06033 890 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 FAM26DQ5JW98 314 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 SYDE2Q5VT97 1194 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 RASGRP2Q7LDG7 609 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 DEPDC4Q8N2C3 294 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 RASGRP4Q8TDF6 673 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 NSUN6Q8TEA1 469 aaKnown RBP7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 DCAF4Q8WV16 495 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 SNX21Q969T3 373 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 IWS1Q96ST2 819 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 POMKQ9H5K3 350 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 NCDNQ9UBB6 729 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 PCDHB12Q9Y5F1 795 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
SPTLC2-206ENST00000557566 SPEGQ15772 3267 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 DCDC2BA2VCK2 349 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 H3BRB1 525 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 KINO60870 393 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 CHGBP05060 677 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SLC3A2P08195 630 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 IFIT2P09913 472 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SMIM10L2AP0DMW4 78 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SMIM10L2BP0DMW5 78 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 GHRP10912 638 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 MTHFRP42898 656 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 TFAP4Q01664 338 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 KCNC3Q14003 757 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms