RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 TMEM119Q4V9L6 283 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 PRPF38BQ5VTL8 546 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 EFCAB12Q6NXP0 572 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 KCNK18Q7Z418 384 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 RSPH3Q86UC2 560 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 PLIN2Q99541 437 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 RSPH10B2B2RC85 870 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 E9PMD0 336 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 CHRNA1P02708 482 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 RPLP2P05387 115 aaKnown RBP16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 XRCC6P12956 609 aaKnown RBP eCLIP16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 RFC5P40937 340 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 UBA7P41226 1012 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 EPHB4P54760 987 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 PPIGQ13427 754 aaKnown RBP eCLIP16.56■□□□□ 0.242e-6■□□□□ 10.1
VIPAS39-210ENST00000557466 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 GPNMBQ14956 572 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 EMC2Q15006 297 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 OSBPL7Q9BZF2 842 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 XPNPEP1Q9NQW7 623 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 CDY2AQ9Y6F7 541 aa16.56■□□□□ 0.24
VIPAS39-210ENST00000557466 SLC26A4O43511 780 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 NBNO60934 754 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 VTNP04004 478 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 KARSQ15046 597 aaKnown RBP16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 SLC7A3Q8WY07 619 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 MAP7D2Q96T17 732 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 NT5C3AQ9H0P0 336 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 BHMT2Q9H2M3 363 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 IL23AQ9NPF7 189 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 AKT3Q9Y243 479 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 TRPV2Q9Y5S1 764 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
VIPAS39-210ENST00000557466 ARHGEF35A5YM69 484 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 CUTAO60888 179 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 EYA4O95677 639 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 ACRP10323 421 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 PLCG1P19174 1290 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 TMOD1P28289 359 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 RFC2P35250 354 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 NME8Q8N427 588 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 TMEM143Q96AN5 459 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 SPATA32Q96LK8 384 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 MTRQ99707 1265 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 MYH11P35749 1972 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
VIPAS39-210ENST00000557466 M0QZ92 97 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 DGAT1O75907 488 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 TXLNAP40222 546 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 ME1P48163 572 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 IER5Q5VY09 327 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 SHC4Q6S5L8 630 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 PADI6Q6TGC4 694 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 C16orf59Q7L2K0 433 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 EXOC8Q8IYI6 725 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 RASSF8Q8NHQ8 419 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 CELF4Q9BZC1 486 aaKnown RBP16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 SUCLA2Q9P2R7 463 aaPredicted RBP16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
VIPAS39-210ENST00000557466 GAS2O43903 313 aaKnown RBP16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 GPR32O75388 356 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 CXCL10P02778 98 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 GHRP10912 638 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 BMP8BP34820 402 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 DNM2P50570 870 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 GPC3P51654 580 aa16.52■□□□□ 0.24
VIPAS39-210ENST00000557466 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms