RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 CATIPQ7Z7H3 387 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 CMTR1Q8N1G2 835 aaKnown RBP14.35□□□□□ -0.11
PSEN1-221ENST00000557293 SLC39A11Q8N1S5 342 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PSEN1-221ENST00000557293 RMDN1Q96DB5 314 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
PSEN1-221ENST00000557293 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-221ENST00000557293 VPS13AQ96RL7 3174 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 EVPLQ92817 2033 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 HBP1O60381 514 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 AOC1P19801 751 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 CRYBB1P53674 252 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-221ENST00000557293 TRDNQ13061 729 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 COL9A3Q14050 684 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-221ENST00000557293 KIZQ2M2Z5 673 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 CLLU1OSQ5K130 101 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
PSEN1-221ENST00000557293 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
PSEN1-221ENST00000557293 KIAA1841Q6NSI8 718 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 MB21D2Q8IYB1 491 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-221ENST00000557293 CCDC105Q8IYK2 499 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 PPP1R16BQ96T49 567 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 LY9Q9HBG7 655 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 USTQ9Y2C2 406 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 ZNF292O60281 2723 aa14.34□□□□□ -0.11
PSEN1-221ENST00000557293 EP300Q09472 2414 aaPredicted RBP14.33□□□□□ -0.12
PSEN1-221ENST00000557293 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 ERICH2A1L162 156 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 CXCL14O95715 111 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 IGHDP01880 384 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 EPCAMP16422 314 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 NUCB1Q02818 461 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 KRT17Q04695 432 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
PSEN1-221ENST00000557293 ANGPT1Q15389 498 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 ODR4Q5SWX8 454 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 ECHDC2Q86YB7 292 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 DTWD2Q8NBA8 298 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 FLCNQ8NFG4 579 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 NCOA7Q8NI08 942 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 OSMRQ99650 979 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
PSEN1-221ENST00000557293 DMDP11532 3685 aa14.33□□□□□ -0.12
PSEN1-221ENST00000557293 NT5C1B-RDH14C9J2C7 533 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 MEIS1O00470 390 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
PSEN1-221ENST00000557293 C22orf31O95567 290 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 EOMESO95936 686 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 VTNP04004 478 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 PPM1AP35813 382 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 SLC26A2P50443 739 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 ZNF484Q5JVG2 852 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 ATAT1Q5SQI0 421 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
PSEN1-221ENST00000557293 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
PSEN1-221ENST00000557293 TDRD5Q8NAT2 981 aaKnown RBP14.32□□□□□ -0.12
PSEN1-221ENST00000557293 AUTS2Q8WXX7 1259 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 ADAMTS10Q9H324 1103 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 CYP26B1Q9NR63 512 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
PSEN1-221ENST00000557293 COL1A2P08123 1366 aa14.32□□□□□ -0.12
PSEN1-221ENST00000557293 SPDYE3A6NKU9 549 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 DDAH1O94760 285 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 LINC01465Q8N7H1 131 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-221ENST00000557293 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 ZBP1Q9H171 429 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
PSEN1-221ENST00000557293 IRAK3Q9Y616 596 aa14.31□□□□□ -0.12
PSEN1-221ENST00000557293 HOXA2O43364 376 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 KIF5BP33176 963 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
PSEN1-221ENST00000557293 CEP55Q53EZ4 464 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 SWSAP1Q6NVH7 229 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 RALYLQ86SE5 291 aaKnown RBP14.3□□□□□ -0.12
PSEN1-221ENST00000557293 TMEM173Q86WV6 379 aaPredicted RBP14.3□□□□□ -0.12
PSEN1-221ENST00000557293 LRRC43Q8N309 656 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 RTP3Q9BQQ7 232 aa14.3□□□□□ -0.12
PSEN1-221ENST00000557293 DBR1Q9UK59 544 aaKnown RBP14.3□□□□□ -0.12
PSEN1-221ENST00000557293 A0A0U1RQF3 1178 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 RXRAP19793 462 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 GNAQP50148 359 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
PSEN1-221ENST00000557293 BCAR1P56945 870 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 TDGQ13569 410 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 TMC5Q6UXY8 1006 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 GPR149Q86SP6 731 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 VPS52Q8N1B4 723 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 BCL7CQ8WUZ0 217 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms