RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 HOXB8P17481 243 aaPredicted RBP14□□□□□ -0.17
SNX6-209ENST00000557265 ATP4AP20648 1035 aa14□□□□□ -0.17
SNX6-209ENST00000557265 ZNF76P36508 570 aa14□□□□□ -0.17
SNX6-209ENST00000557265 SWSAP1Q6NVH7 229 aa14□□□□□ -0.17
SNX6-209ENST00000557265 PDXDC2PQ6P474 469 aa14□□□□□ -0.17
SNX6-209ENST00000557265 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
SNX6-209ENST00000557265 FAM228AQ86W67 206 aa14□□□□□ -0.17
SNX6-209ENST00000557265 MICU3Q86XE3 530 aa14□□□□□ -0.17
SNX6-209ENST00000557265 METTL13Q8N6R0 699 aa14□□□□□ -0.17
SNX6-209ENST00000557265 KREMEN2Q8NCW0 462 aa14□□□□□ -0.17
SNX6-209ENST00000557265 RIPOR3Q96MK2 946 aa14□□□□□ -0.17
SNX6-209ENST00000557265 CASD1Q96PB1 797 aa14□□□□□ -0.17
SNX6-209ENST00000557265 ANO3Q9BYT9 981 aa14□□□□□ -0.17
SNX6-209ENST00000557265 ELAC1Q9H777 363 aaKnown RBP14□□□□□ -0.17
SNX6-209ENST00000557265 NGRNQ9NPE2 291 aaKnown RBP14□□□□□ -0.17
SNX6-209ENST00000557265 COL1A2P08123 1366 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 USP34Q70CQ2 3546 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 GPR32O75388 356 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 C22orf31O95567 290 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 VTNP04004 478 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 PBX3P40426 434 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 ADCY7P51828 1080 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 KRT17Q04695 432 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 DSC3Q14574 896 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 MIS18BP1Q6P0N0 1132 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 KCNT2Q6UVM3 1135 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
SNX6-209ENST00000557265 TMC7Q7Z402 723 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 CKAP2LQ8IYA6 745 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 TMEM117Q9H0C3 514 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
SNX6-209ENST00000557265 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
SNX6-209ENST00000557265 PTPRZ1P23471 2315 aaPredicted RBP13.98□□□□□ -0.17
SNX6-209ENST00000557265 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 SLC27A2O14975 620 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
SNX6-209ENST00000557265 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 SREBF1P36956 1147 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 SYNE3Q6ZMZ3 975 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 NIPA1Q7RTP0 329 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 ZNF558Q96NG5 402 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 LSG1Q9H089 658 aaKnown RBP13.98□□□□□ -0.17
SNX6-209ENST00000557265 RNF19AQ9NV58 838 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
SNX6-209ENST00000557265 CNTNAP5Q8WYK1 1306 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 HOXA2O43364 376 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
SNX6-209ENST00000557265 PPM1AP35813 382 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 NUBP1P53384 320 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 MTMR3Q13615 1198 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 TPRNQ4KMQ1 711 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 CES5AQ6NT32 575 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 SGMS1Q86VZ5 419 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 ABI1Q8IZP0 508 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 LRRC43Q8N309 656 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
SNX6-209ENST00000557265 RNF169Q8NCN4 708 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
SNX6-209ENST00000557265 CASP10Q92851 521 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
SNX6-209ENST00000557265 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 HCFC2Q9Y5Z7 792 aa13.97□□□□□ -0.17
SNX6-209ENST00000557265 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 IPO5O00410 1097 aaKnown RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 BRD1O95696 1058 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 CLCN3P51790 818 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 NLRP11P59045 1033 aaKnown RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 ITIH3Q06033 890 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 FUT2Q10981 343 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 SMC1AQ14683 1233 aaKnown RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 JAKMIP3Q5VZ66 844 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 CREB3L3Q68CJ9 461 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 APOA5Q6Q788 366 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 ECHDC2Q86YB7 292 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 UBALD2Q8IYN6 164 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 POMKQ9H5K3 350 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 BARHL2Q9NY43 387 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 AKT3Q9Y243 479 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 MAFBQ9Y5Q3 323 aaPredicted RBP13.96□□□□□ -0.17
SNX6-209ENST00000557265 KIAA1671Q9BY89 1806 aa13.96□□□□□ -0.17
SNX6-209ENST00000557265 IGLV3-22A0A075B6J6 115 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 C2orf71A6NGG8 1288 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 PROB1E7EW31 1015 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 hCG_1984214I3L0E3 225 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 MAGEB2O15479 319 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 CLASP2O75122 1294 aaKnown RBP13.95□□□□□ -0.18
SNX6-209ENST00000557265 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 NECTIN1Q15223 517 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 RTN1Q16799 776 aa13.95□□□□□ -0.18
SNX6-209ENST00000557265 CLLU1OSQ5K130 101 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms