RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TMOD1P28289 359 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 FAM189BP81408 668 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 EFCAB12Q6NXP0 572 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 ZNF710Q8N1W2 664 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 PPP2R3CQ969Q6 453 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 PPP1R16BQ96T49 567 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 OSMRQ99650 979 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 PRKAG3Q9UGI9 489 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 EVPLQ92817 2033 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 CPLX1O14810 134 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 GAS7O60861 476 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 DNAJB1P25685 340 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 SFNP31947 248 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 ADAM15Q13444 863 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 FAM228AQ86W67 206 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 TBCKQ8TEA7 893 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 POF1BQ8WVV4 589 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 SLC5A5Q92911 643 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 MAP7D2Q96T17 732 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 TM6SF1Q9BZW5 370 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 AAASQ9NRG9 546 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 PCDHA4Q9UN74 947 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 PCDHB12Q9Y5F1 795 aa17.95■□□□□ 0.46
TUBB3-213ENST00000557262 MYH9P35579 1960 aaKnown RBP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 ZNF862O60290 1169 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 CSPG5O95196 566 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 DEXIO95424 95 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 OATP04181 439 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 CLCN3P51790 818 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 JAK3P52333 1124 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 NLRP11P59045 1033 aaKnown RBP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 DLX2Q07687 328 aaPredicted RBP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 DSC3Q14574 896 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 Q4G0T1 1027 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 SPOUT1Q5T280 376 aaKnown RBP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 LRCH2Q5VUJ6 765 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 LINC01465Q8N7H1 131 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 ELAC1Q9H777 363 aaKnown RBP17.94■□□□□ 0.46
TUBB3-213ENST00000557262 ATP6V0A4Q9HBG4 840 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 TMEM161AQ9NX61 479 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 AKT3Q9Y243 479 aa17.94■□□□□ 0.46
TUBB3-213ENST00000557262 CYP3A7-CYP3A51PA0A087WV96 503 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 ALADP13716 330 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 CYP3A7P24462 503 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 GALNT17Q6IS24 598 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
TUBB3-213ENST00000557262 BLIDQ8IZY5 108 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
TUBB3-213ENST00000557262 LARP6Q9BRS8 491 aaKnown RBP17.93■□□□□ 0.46
TUBB3-213ENST00000557262 ADAMTS10Q9H324 1103 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 UNC45AQ9H3U1 944 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 C11orf16Q9NQ32 467 aa17.93■□□□□ 0.46
TUBB3-213ENST00000557262 TYW1Q9NV66 732 aaKnown RBP17.93■□□□□ 0.46
TUBB3-213ENST00000557262 ATG2AQ2TAZ0 1938 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 C19orf67A6NJJ6 358 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 LINC01565O15544 149 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 MBTPS2O43462 519 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 CHMP2AO43633 222 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 PSMD10O75832 226 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 ZSCAN20P17040 1043 aaPredicted RBP17.92■□□□□ 0.46
TUBB3-213ENST00000557262 EIF4BP23588 611 aaKnown RBP17.92■□□□□ 0.46
TUBB3-213ENST00000557262 IRS1P35568 1242 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 PRKCEQ02156 737 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 UBE3AQ05086 875 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 ZP2Q05996 745 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 SMAD2Q15796 467 aaKnown RBP17.92■□□□□ 0.46
TUBB3-213ENST00000557262 MIER3Q7Z3K6 550 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 ADHFE1Q8IWW8 467 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 DAGLBQ8NCG7 672 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 RDM1Q8NG50 284 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 MICAL1Q8TDZ2 1067 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 GJA10Q969M2 543 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
TUBB3-213ENST00000557262 M0R2N6 131 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 TBC1D8BQ0IIM8 1120 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 STK3Q13188 491 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 CLUL1Q15846 466 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 UGCGQ16739 394 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 ADGRD2Q7Z7M1 963 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 EFHBQ8N7U6 833 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 UPF3BQ9BZI7 483 aaKnown RBP17.91■□□□□ 0.46
TUBB3-213ENST00000557262 CD207Q9UJ71 328 aa17.91■□□□□ 0.46
TUBB3-213ENST00000557262 ARIH1Q9Y4X5 557 aaPredicted RBP17.91■□□□□ 0.46
TUBB3-213ENST00000557262 FAM86C2PA6NEL3 165 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 TBX10O75333 385 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 FGF18O76093 207 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 TDP2O95551 362 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 FGFR1P11362 822 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 NRIP1P48552 1158 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 NDUFV1P49821 464 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 CDC42EP1Q00587 391 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 SMAD4Q13485 552 aaKnown RBP17.9■□□□□ 0.46
TUBB3-213ENST00000557262 TARBP2Q15633 366 aaKnown RBP17.9■□□□□ 0.46
TUBB3-213ENST00000557262 CSPP1Q1MSJ5 1256 aa17.9■□□□□ 0.46
TUBB3-213ENST00000557262 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms