RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SETD4Q9NVD3 440 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 TRIOO75962 3097 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 KAT6AQ92794 2004 aa9.97□□□□□ -0.81
VRK1-206ENST00000557222 E7EWF7 191 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 MAFGO15525 162 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 DDAH1O94760 285 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 TTC22Q5TAA0 569 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 IGDCC4Q8TDY8 1250 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 TNPO1Q92973 898 aaKnown RBP9.96□□□□□ -0.82
VRK1-206ENST00000557222 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 RRP36Q96EU6 259 aaKnown RBP9.96□□□□□ -0.82
VRK1-206ENST00000557222 IL17RAQ96F46 866 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 KCNH6Q9H252 994 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 IL25Q9H293 177 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 NSUN3Q9H649 340 aaKnown RBP9.96□□□□□ -0.82
VRK1-206ENST00000557222 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 EHMT1Q9H9B1 1298 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 CD320Q9NPF0 282 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 SQORQ9Y6N5 450 aa9.96□□□□□ -0.82
VRK1-206ENST00000557222 ERVH48-1M5A8F1 160 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 MEIS2O14770 477 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 SORBS3O60504 671 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 CHMLP26374 656 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 BMPR1AP36894 532 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 ARHGAP4P98171 946 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 FIBCD1Q8N539 461 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 CTCFLQ8NI51 663 aaPredicted RBP9.95□□□□□ -0.82
VRK1-206ENST00000557222 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 LMBR1Q8WVP7 490 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 SEPT1Q8WYJ6 367 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 MAP4K1Q92918 833 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
VRK1-206ENST00000557222 C11orf84Q9BUA3 381 aaPredicted RBP9.95□□□□□ -0.82
VRK1-206ENST00000557222 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 UPF3BQ9BZI7 483 aaKnown RBP9.95□□□□□ -0.82
VRK1-206ENST00000557222 ERAP1Q9NZ08 941 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
VRK1-206ENST00000557222 SEC63Q9UGP8 760 aaKnown RBP9.95□□□□□ -0.82
VRK1-206ENST00000557222 TTC3P53804 2025 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 MBLAC1A4D2B0 266 aaPredicted RBP9.94□□□□□ -0.82
VRK1-206ENST00000557222 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 H3BM21 787 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 SGSM2O43147 1006 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 WIPF1O43516 503 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 CHRNA1P02708 482 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 CTSHP09668 335 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 CALM1P0DP23 149 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 CALM2P0DP24 149 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 CALM3P0DP25 149 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 GSPT1P15170 499 aaKnown RBP9.94□□□□□ -0.82
VRK1-206ENST00000557222 PTH1RQ03431 593 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 MGAT3Q09327 533 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 NAALADL2Q58DX5 795 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 TCEAL5Q5H9L2 206 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 UTP14CQ5TAP6 766 aaKnown RBP9.94□□□□□ -0.82
VRK1-206ENST00000557222 MB21D2Q8IYB1 491 aaPredicted RBP9.94□□□□□ -0.82
VRK1-206ENST00000557222 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 RC3H2Q9HBD1 1191 aaKnown RBP9.94□□□□□ -0.82
VRK1-206ENST00000557222 DNMT3LQ9UJW3 386 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
VRK1-206ENST00000557222 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ADGRA3Q8IWK6 1321 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ENPP3O14638 875 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 DCXO43602 365 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 LINC00271P0C7V0 271 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 IL9P15248 144 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 KCNA2P16389 499 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 TCF7P36402 384 aaPredicted RBP9.93□□□□□ -0.82
VRK1-206ENST00000557222 LIFRP42702 1097 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ANTXR2P58335 489 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 USP17L6PQ6QN14 398 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 CASC1Q6TDU7 716 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 TSHZ1Q6ZSZ6 1077 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ADHFE1Q8IWW8 467 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ZNF654Q8IZM8 581 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 P2RX5Q93086 422 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 ZNF689Q96CS4 500 aaPredicted RBP9.93□□□□□ -0.82
VRK1-206ENST00000557222 TMEM87BQ96K49 555 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 POP1Q99575 1024 aaKnown RBP9.93□□□□□ -0.82
VRK1-206ENST00000557222 FTHL17Q9BXU8 183 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 PSTPIP2Q9H939 334 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 UBIAD1Q9Y5Z9 338 aa9.93□□□□□ -0.82
VRK1-206ENST00000557222 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 SPINT1O43278 529 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 LILRA1O75019 489 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 MCM5P33992 734 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 CTNNB1P35222 781 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 ZP2Q05996 745 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 NR1H3Q13133 447 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 LPIN1Q14693 890 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 GRIK4Q16099 956 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 FBXO47Q5MNV8 452 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 IER5Q5VY09 327 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 NME8Q8N427 588 aa9.92□□□□□ -0.82
VRK1-206ENST00000557222 PPP2R3CQ969Q6 453 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms