RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 DRC3Q9H069 523 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 IRAK4Q9NWZ3 460 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 CPDO75976 1380 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 AMPD2Q01433 879 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ILF2Q12905 390 aaKnown RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 PADI6Q6TGC4 694 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 LRGUKQ96M69 825 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 RARBP10826 455 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 GDAP1Q8TB36 358 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 LRRC8CQ8TDW0 803 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 PODXLO00592 558 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 SLC16A2P36021 539 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 RGS2P41220 211 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 ARHGEF2Q92974 986 aaKnown RBP12.84□□□□□ -0.35
NEK9-210ENST00000557026 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 SLC9A2Q9UBY0 812 aa12.84□□□□□ -0.35
NEK9-210ENST00000557026 IQANK1A0A1B0GTG1 560 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 DGAT1O75907 488 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 HPDP32754 393 aaPredicted RBP12.83□□□□□ -0.35
NEK9-210ENST00000557026 MSH2P43246 934 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 ST8SIA6P61647 398 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 SGO2Q562F6 1265 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 RAPH1Q70E73 1250 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 HAUS6Q7Z4H7 955 aa12.83□□□□□ -0.35
NEK9-210ENST00000557026 N4BP2L2Q92802 583 aaPredicted RBP12.83□□□□□ -0.35
NEK9-210ENST00000557026 MAGOHBQ96A72 148 aaKnown RBP12.83□□□□□ -0.35
NEK9-210ENST00000557026 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.35
NEK9-210ENST00000557026 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 EFCAB8A8MWE9 144 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 F5H6K3 240 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 ZNF197O14709 1029 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 IL18RAPO95256 599 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 KLRC3Q07444 240 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.36
NEK9-210ENST00000557026 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 TRIM15Q9C019 465 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
NEK9-210ENST00000557026 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 PPFIA2O75334 1257 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 SUPT20HL2P0C7V6 817 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 RWDD2BP57060 319 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 Q3C1V9 767 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
NEK9-210ENST00000557026 H3BRJ5 948 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEK9-210ENST00000557026 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
NEK9-210ENST00000557026 PDIA5Q14554 519 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 BTBD8Q5XKL5 378 aa12.83□□□□□ -0.36
NEK9-210ENST00000557026 UBE2TQ9NPD8 197 aaPredicted RBP12.83□□□□□ -0.36
NEK9-210ENST00000557026 SOX5P35711 763 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 WASHC5Q12768 1159 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 CDKL3Q8IVW4 592 aaPredicted RBP12.82□□□□□ -0.36
NEK9-210ENST00000557026 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 SCFD2Q8WU76 684 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 SEPT1Q8WYJ6 367 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 OSBP2Q969R2 916 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 EDC3Q96F86 508 aaKnown RBP12.82□□□□□ -0.36
NEK9-210ENST00000557026 DCP1AQ9NPI6 582 aaPredicted RBP12.82□□□□□ -0.36
NEK9-210ENST00000557026 DNAJC8O75937 253 aaPredicted RBP12.82□□□□□ -0.36
NEK9-210ENST00000557026 GFPT2O94808 682 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 MESDQ14696 234 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 MMEL1Q495T6 779 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 EFHC2Q5JST6 749 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 CENPUQ71F23 418 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 CD302Q8IX05 232 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
NEK9-210ENST00000557026 LRRC37BQ96QE4 947 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 THEGQ9P2T0 379 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 SDC4P31431 198 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 PNPLA4P41247 253 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 KRT17Q04695 432 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 CUL4AQ13619 759 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 LAMC2Q13753 1193 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 MUTP22033 750 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 DDIT3P35638 169 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 CDK17Q00537 523 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 DIP2AQ14689 1571 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 ANKRD20A4Q4UJ75 823 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 ANKRD20A8PQ5CZ79 823 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
NEK9-210ENST00000557026 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms