RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 TMEM266Q2M3C6 531 aa25.53■■□□□ 1.68
TMEM260-214ENST00000556975 CLP1Q92989 425 aaKnown RBP25.53■■□□□ 1.68
TMEM260-214ENST00000556975 NIFKQ9BYG3 293 aaKnown RBP25.53■■□□□ 1.68
TMEM260-214ENST00000556975 RWDD3Q9Y3V2 267 aa25.53■■□□□ 1.68
TMEM260-214ENST00000556975 XIRP2A4UGR9 3374 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 NLRC5Q86WI3 1866 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 TBX3O15119 743 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 STBD1O95210 358 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 VTNP04004 478 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 STAG3L1P0CL83 205 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 CLCN3P51790 818 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 KIZQ2M2Z5 673 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 XKR3Q5GH77 459 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 PIK3AP1Q6ZUJ8 805 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 MRPL38Q96DV4 380 aaKnown RBP25.52■■□□□ 1.68
TMEM260-214ENST00000556975 ST3GAL5Q9UNP4 418 aa25.52■■□□□ 1.68
TMEM260-214ENST00000556975 TCF20Q9UGU0 1960 aaKnown RBP25.51■■□□□ 1.67
TMEM260-214ENST00000556975 BMPR1AP36894 532 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 PPP2R5CQ13362 524 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 GPM6BQ13491 265 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 PTPROQ16827 1216 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 EARS2Q5JPH6 523 aaKnown RBP25.51■■□□□ 1.67
TMEM260-214ENST00000556975 IL27Q8NEV9 243 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 TNFRSF25Q93038 417 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 CEP89Q96ST8 783 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 MAP7D2Q96T17 732 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 OSMRQ99650 979 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 RGS18Q9NS28 235 aa25.51■■□□□ 1.67
TMEM260-214ENST00000556975 CCNT1O60563 726 aaKnown RBP25.5■■□□□ 1.67
TMEM260-214ENST00000556975 KRT2P35908 639 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 SARSP49591 514 aaKnown RBP25.5■■□□□ 1.67
TMEM260-214ENST00000556975 BTG3Q14201 252 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-214ENST00000556975 FAM228AQ86W67 206 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 CMTR2Q8IYT2 770 aaKnown RBP25.5■■□□□ 1.67
TMEM260-214ENST00000556975 HLA-CQ95604 372 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 ADAMTS10Q9H324 1103 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 BRMS1Q9HCU9 246 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 C1orf112Q9NSG2 853 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 RNF216Q9NWF9 866 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-214ENST00000556975 VAV3Q9UKW4 847 aa25.5■■□□□ 1.67
TMEM260-214ENST00000556975 MGEA5O60502 916 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 BMP1P13497 986 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 NLRP11P59045 1033 aaKnown RBP25.49■■□□□ 1.67
TMEM260-214ENST00000556975 PSMC5P62195 406 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 TFF2Q03403 129 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 TBC1D8BQ0IIM8 1120 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 NR5A1Q13285 461 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 LRRC71Q8N4P6 559 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 ADAMTS19Q8TE59 1207 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 HAS1Q92839 578 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 AKT3Q9Y243 479 aa25.49■■□□□ 1.67
TMEM260-214ENST00000556975 IGKV6-21A0A0C4DH24 114 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 EML1O00423 815 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 ST3GAL1Q11201 340 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 SLC24A5Q71RS6 500 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 PPP1R16BQ96T49 567 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 ADAM2Q99965 735 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 LIMCH1Q9UPQ0 1083 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 BRWD1Q9NSI6 2320 aa25.48■■□□□ 1.67
TMEM260-214ENST00000556975 C9IYK1 514 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 JAK2O60674 1132 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 MMP1P03956 469 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 EIF4BP23588 611 aaKnown RBP25.47■■□□□ 1.67
TMEM260-214ENST00000556975 CTNNB1P35222 781 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 GPC3P51654 580 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 FAM189BP81408 668 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 DSC3Q14574 896 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 C11orf84Q9BUA3 381 aaPredicted RBP25.47■■□□□ 1.67
TMEM260-214ENST00000556975 PLVAPQ9BX97 442 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 SEPT9Q9UHD8 586 aaPredicted RBP25.47■■□□□ 1.67
TMEM260-214ENST00000556975 LRFN2Q9ULH4 789 aa25.47■■□□□ 1.67
TMEM260-214ENST00000556975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.46■■□□□ 1.67
TMEM260-214ENST00000556975 DENND3A2RUS2 1198 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 DKC1O60832 514 aaKnown RBP eCLIP25.46■■□□□ 1.67
TMEM260-214ENST00000556975 QARSP47897 775 aaKnown RBP25.46■■□□□ 1.67
TMEM260-214ENST00000556975 CDC42EP1Q00587 391 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 C8orf34Q49A92 452 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 MTERF2Q49AM1 385 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 BANK1Q8NDB2 785 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 LMAN2LQ9H0V9 348 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 PCDHB7Q9Y5E2 793 aa25.46■■□□□ 1.67
TMEM260-214ENST00000556975 FAM205CA6NFA0 338 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 P4HBP07237 508 aaKnown RBP25.45■■□□□ 1.66
TMEM260-214ENST00000556975 EPHA7Q15375 998 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 TIGD5Q53EQ6 642 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 NAALADL2Q58DX5 795 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 ANO5Q75V66 913 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 POTEDQ86YR6 584 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 SLFN12Q8IYM2 578 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 P2RX5Q93086 422 aa25.45■■□□□ 1.66
TMEM260-214ENST00000556975 UHRF1Q96T88 793 aaPredicted RBP25.45■■□□□ 1.66
TMEM260-214ENST00000556975 ELAC1Q9H777 363 aaKnown RBP25.45■■□□□ 1.66
TMEM260-214ENST00000556975 MRPL42Q9Y6G3 142 aaKnown RBP25.45■■□□□ 1.66
TMEM260-214ENST00000556975 TMEM150BA6NC51 233 aa25.44■■□□□ 1.66
TMEM260-214ENST00000556975 DDX11L8A8MPP1 907 aa25.44■■□□□ 1.66
TMEM260-214ENST00000556975 BTBD18B2RXH4 712 aa25.44■■□□□ 1.66
TMEM260-214ENST00000556975 MAFO75444 373 aaPredicted RBP25.44■■□□□ 1.66
TMEM260-214ENST00000556975 BAG4O95429 457 aaKnown RBP25.44■■□□□ 1.66
TMEM260-214ENST00000556975 KCNQ1P51787 676 aa25.44■■□□□ 1.66
TMEM260-214ENST00000556975 TRIM29Q14134 588 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms