RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 DDX11L8A8MPP1 907 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 UPP2O95045 317 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 RPLP2P05387 115 aaKnown RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 QARSP47897 775 aaKnown RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 MCM2P49736 904 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 NPEPPSP55786 919 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 TAP1Q03518 808 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 PAK2Q13177 524 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 EPHA7Q15375 998 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 TARBP2Q15633 366 aaKnown RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 ANO5Q75V66 913 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 MTMR9Q96QG7 549 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 PADI3Q9ULW8 664 aa11.64□□□□□ -0.55
SNX6-208ENST00000556712 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
SNX6-208ENST00000556712 CHD7Q9P2D1 2997 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 RFXAPO00287 272 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 ZBTB39O15060 712 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 MAGEB2O15479 319 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 MGEA5O60502 916 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 GPR32O75388 356 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 NLRP11P59045 1033 aaKnown RBP11.63□□□□□ -0.55
SNX6-208ENST00000556712 C1QBPQ07021 282 aaKnown RBP11.63□□□□□ -0.55
SNX6-208ENST00000556712 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 MCTP1Q6DN14 999 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 FAM228AQ86W67 206 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 NME8Q8N427 588 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 ARNTL2Q8WYA1 636 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 MAP7D2Q96T17 732 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 EIF2AK1Q9BQI3 630 aaKnown RBP11.63□□□□□ -0.55
SNX6-208ENST00000556712 NIFKQ9BYG3 293 aaKnown RBP11.63□□□□□ -0.55
SNX6-208ENST00000556712 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 ERVK-5Q9HDB9 667 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 MTUS1Q9ULD2 1270 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 PCDHA12Q9UN75 941 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 COL6A3P12111 3177 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 RALGAPA2Q2PPJ7 1873 aa11.63□□□□□ -0.55
SNX6-208ENST00000556712 ATG2AQ2TAZ0 1938 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 TTC3P53804 2025 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 LINC01553A4QN01 128 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 FGFR4P22455 802 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 U2AF2P26368 475 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNX6-208ENST00000556712 YWHABP31946 246 aaKnown RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 GPC3P51654 580 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 NFX1Q12986 1120 aaKnown RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 TPH2Q8IWU9 490 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 MAFAQ8NHW3 353 aaPredicted RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 TOP1MTQ969P6 601 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 SCLT1Q96NL6 688 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 YME1L1Q96TA2 773 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 RAD9AQ99638 391 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
SNX6-208ENST00000556712 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 MYO9BQ13459 2157 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 EYSQ5T1H1 3165 aa11.62□□□□□ -0.55
SNX6-208ENST00000556712 A0A087WWV3 80 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 IGKV6-21A0A0C4DH24 114 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 H3BQV1 296 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 ENPP3O14638 875 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 CSDE1O75534 798 aaKnown RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 IGFBP4P22692 258 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 TMOD1P28289 359 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 TECP42680 631 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 POLGP54098 1239 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 HTRA4P83105 476 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 CUL4AQ13619 759 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 RTN4RL1Q86UN2 441 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 KSR1Q8IVT5 923 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 C4orf19Q8IY42 314 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 USP38Q8NB14 1042 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 CEP170P1Q96L14 293 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 C17orf80Q9BSJ5 609 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 ZSWIM4Q9H7M6 989 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 FOXD4L1Q9NU39 408 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 ST3GAL5Q9UNP4 418 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 SQORQ9Y6N5 450 aa11.61□□□□□ -0.55
SNX6-208ENST00000556712 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
SNX6-208ENST00000556712 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX6-208ENST00000556712 MAFO75444 373 aaPredicted RBP11.6□□□□□ -0.55
SNX6-208ENST00000556712 MED24O75448 989 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 SLITRK3O94933 977 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 GATMP50440 423 aa11.6□□□□□ -0.55
SNX6-208ENST00000556712 EMC2Q15006 297 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms