RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ACRP10323 421 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 KLRC1P26715 233 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 THPOP40225 353 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 QARSP47897 775 aaKnown RBP10.84□□□□□ -0.67
SRP54-210ENST00000556380 PSMC5P62195 406 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 IGBP1P78318 339 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 PRKCEQ02156 737 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 MGAT3Q09327 533 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 PTGDRQ13258 359 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 IL17AQ16552 155 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 RILPL1Q5EBL4 403 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 XKR3Q5GH77 459 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 TAF2Q6P1X5 1199 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 MTHFD1LQ6UB35 978 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 ANO5Q75V66 913 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 KIAA0319LQ8IZA0 1049 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 LINC01465Q8N7H1 131 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 BANK1Q8NDB2 785 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 FAM167AQ96KS9 214 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 OSBPL7Q9BZF2 842 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 NRBP2Q9NSY0 501 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 RGL1Q9NZL6 768 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 SZT2Q5T011 3432 aa10.84□□□□□ -0.67
SRP54-210ENST00000556380 SMIM35A0A1B0GVV1 85 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 RSPH10B2B2RC85 870 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 SMAPO00193 183 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 LYPLA2O95372 231 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 PARNO95453 639 aaKnown RBP10.83□□□□□ -0.68
SRP54-210ENST00000556380 C22orf31O95567 290 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 CHRNA1P02708 482 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 RSPH10BP0C881 870 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 RESTQ13127 1097 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 TCTN1Q2MV58 587 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 LRIT3Q3SXY7 679 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 NCAPH2Q6IBW4 605 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 ZNF365Q70YC5 407 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 C4orf19Q8IY42 314 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 CKAP2LQ8IYA6 745 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 RPUSD2Q8IZ73 545 aaKnown RBP10.83□□□□□ -0.68
SRP54-210ENST00000556380 TET1Q8NFU7 2136 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 DNAJB3Q8WWF6 145 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 HERVK_113Q902F9 699 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 DYDC2Q96IM9 177 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 EIF2AK1Q9BQI3 630 aaKnown RBP10.83□□□□□ -0.68
SRP54-210ENST00000556380 CHD9Q3L8U1 2897 aa10.83□□□□□ -0.68
SRP54-210ENST00000556380 IGKV6-21A0A0C4DH24 114 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 VPS37CA5D8V6 355 aaPredicted RBP10.82□□□□□ -0.68
SRP54-210ENST00000556380 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 ZBTB39O15060 712 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 STX6O43752 255 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 FGBP02675 491 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 PFKMP08237 780 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 SPATA31C1P0DKV0 1188 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 PRPHP41219 470 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 TECP42680 631 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 PDIA5Q14554 519 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
SRP54-210ENST00000556380 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
SRP54-210ENST00000556380 DEFB128Q7Z7B8 93 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 FERMT3Q86UX7 667 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 NME8Q8N427 588 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 LXNQ9BS40 222 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 ZSWIM4Q9H7M6 989 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
SRP54-210ENST00000556380 KAT6AQ92794 2004 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 LAD1O00515 517 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 MAGEB2O15479 319 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 RPLP2P05387 115 aaKnown RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 NPEPPSP55786 919 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 MRPS6P82932 125 aaKnown RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 ATP2C1P98194 919 aaPredicted RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 CTTNQ14247 550 aaKnown RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 CATSPER3Q86XQ3 398 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 NEK9Q8TD19 979 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 POLR3CQ9BUI4 534 aaPredicted RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 FAM49AQ9H0Q0 323 aaPredicted RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 CXXC1Q9P0U4 656 aaPredicted RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
SRP54-210ENST00000556380 KDM3AQ9Y4C1 1321 aa10.81□□□□□ -0.68
SRP54-210ENST00000556380 MYH9P35579 1960 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 SOX1O00570 391 aaPredicted RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 DKC1O60832 514 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRP54-210ENST00000556380 MAFO75444 373 aaPredicted RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 MED24O75448 989 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 CTSHP09668 335 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 XRCC6P12956 609 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRP54-210ENST00000556380 RPA1P27694 616 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 YWHABP31946 246 aaKnown RBP10.8□□□□□ -0.68
SRP54-210ENST00000556380 FXR1P51114 621 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRP54-210ENST00000556380 CYP4A11Q02928 519 aa10.8□□□□□ -0.68
SRP54-210ENST00000556380 ECM1Q16610 540 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms