RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 COPB2P35606 906 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 CDK7P50613 346 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 PPP2R3AQ06190 1150 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 FRMPD3Q5JV73 1810 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 RNF180Q86T96 592 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 ZDHHC13Q8IUH4 622 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 FBLIM1Q8WUP2 373 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 MKL1Q969V6 931 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 DNAJC2Q99543 621 aaKnown RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 CCDC86Q9H6F5 360 aaKnown RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 ZFP64Q9NPA5 681 aa10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 PRDM5Q9NQX1 630 aaPredicted RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 ZNFX1Q9P2E3 1918 aaKnown RBP10.71□□□□□ -0.69
GTF2A1-204ENST00000556268 CDH23Q9H251 3354 aa10.71□□□□□ -0.7
GTF2A1-204ENST00000556268 EYSQ5T1H1 3165 aa10.71□□□□□ -0.7
GTF2A1-204ENST00000556268 ROBO3Q96MS0 1386 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 PGK1P00558 417 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 GSTP1P09211 210 aaKnown RBP10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 KCTD2Q14681 263 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 SBK1Q52WX2 424 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 MAFAQ8NHW3 353 aaPredicted RBP10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 STRBPQ96SI9 672 aaKnown RBP10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 PUS7LQ9H0K6 701 aaKnown RBP10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 NYAP2Q9P242 653 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 RIPK3Q9Y572 518 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 TTC28Q96AY4 2481 aa10.7□□□□□ -0.7
GTF2A1-204ENST00000556268 SYNGAP1Q96PV0 1343 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 A0A1W2PQ45 241 aaPredicted RBP10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 A0A1W2PQY0 241 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 F5H6K3 240 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 DUSP11O75319 330 aaKnown RBP10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 HMMRO75330 724 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 TGFB1P01137 390 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 AKR1A1P14550 325 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 ACLYP53396 1101 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 NKX3-2P78367 333 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 HNRNPUQ00839 825 aaKnown RBP eCLIP10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 KLRC3Q07444 240 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 FAM83BQ5T0W9 1011 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 C16orf59Q7L2K0 433 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 DYMQ7RTS9 669 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 SULF2Q8IWU5 870 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 PRPF38AQ8NAV1 312 aaKnown RBP10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 STK35Q8TDR2 534 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 MYLIPQ8WY64 445 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 WDR89Q96FK6 387 aaPredicted RBP10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 FAM184BQ9ULE4 1060 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 SLC4A4Q9Y6R1 1079 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 LTBP2Q14767 1821 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 A0A0G2JMZ2 1700 aa10.69□□□□□ -0.7
GTF2A1-204ENST00000556268 ELP1O95163 1332 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 FAM95CA0A1B0GW59 222 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 ANKRD33BA6NCL7 494 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 DCDC2CA8MYV0 355 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 TIMP1P01033 207 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 RAG1P15918 1043 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 LIG1P18858 919 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 RAB6AP20340 208 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 CST5P28325 142 aaPredicted RBP10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 KCNA10Q16322 511 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 RASIP1Q5U651 963 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 ZSCAN25Q6NSZ9 544 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 PDZD3Q86UT5 571 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 SHKBP1Q8TBC3 707 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 NUP133Q8WUM0 1156 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 MFSD14AQ96MC6 490 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 SLF1Q9BQI6 1058 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 C12orf49Q9H741 205 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 FAM105AQ9NUU6 356 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 TBX21Q9UL17 535 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
GTF2A1-204ENST00000556268 GIPC1O14908 333 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 HYAL3O43820 417 aaPredicted RBP10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 PQBP1O60828 265 aaKnown RBP10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 NDUFB10O96000 172 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 FPGSQ05932 587 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 ACVR2BQ13705 512 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 NFKBIBQ15653 356 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 MFSD5Q6N075 450 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 EZH1Q92800 747 aaPredicted RBP10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 YIPF2Q9BWQ6 316 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 SLC38A10Q9HBR0 1119 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 DDX19BQ9UMR2 479 aa10.67□□□□□ -0.7
GTF2A1-204ENST00000556268 CTAGE5O15320 804 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 ZNF862O60290 1169 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 FBXO24O75426 580 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 GJA9P57773 515 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 TMEM240Q5SV17 173 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 PAOXQ6QHF9 649 aa10.66□□□□□ -0.7
GTF2A1-204ENST00000556268 DDX11Q96FC9 970 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms