RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 RFX1P22670 979 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 FAM43BQ6ZT52 329 aaPredicted RBP15.26■□□□□ 0.03
ABCD4-224ENST00000556119 CCDC149Q6ZUS6 474 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 GPR149Q86SP6 731 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
ABCD4-224ENST00000556119 SLC22A17Q8WUG5 538 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 TMEM40Q8WWA1 233 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 AUTS2Q8WXX7 1259 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 ST3GAL5Q9UNP4 418 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 CEP295Q9C0D2 2601 aa15.26■□□□□ 0.03
ABCD4-224ENST00000556119 PATJQ8NI35 1801 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 MS4A1P11836 297 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 CA8P35219 290 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 LMNB2Q03252 620 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 COL9A3Q14050 684 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-224ENST00000556119 SLC35G1Q2M3R5 365 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 SLC39A11Q8N1S5 342 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 NME8Q8N427 588 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 ENAHQ8N8S7 591 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-224ENST00000556119 OTUD7AQ8TE49 926 aaPredicted RBP15.25■□□□□ 0.03
ABCD4-224ENST00000556119 PCYT2Q99447 389 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 ELAC1Q9H777 363 aaKnown RBP15.25■□□□□ 0.03
ABCD4-224ENST00000556119 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
ABCD4-224ENST00000556119 SETXQ7Z333 2677 aaKnown RBP15.24■□□□□ 0.03
ABCD4-224ENST00000556119 SMIM35A0A1B0GVV1 85 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 KLRF2D3W0D1 207 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 KCNA2P16389 499 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 CCDC178Q5BJE1 867 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 IQCA1Q86XH1 822 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 SLC44A3Q8N4M1 653 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 ZSCAN10Q96SZ4 725 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-224ENST00000556119 RNF41Q9H4P4 317 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-224ENST00000556119 GINS2Q9Y248 185 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 WDFY3Q8IZQ1 3526 aa15.24■□□□□ 0.03
ABCD4-224ENST00000556119 LAMA4Q16363 1823 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.23■□□□□ 0.03
ABCD4-224ENST00000556119 NT5C1B-RDH14C9J2C7 533 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 SPTLC1O15269 473 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 LRRN2O75325 713 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 ACAP1Q15027 740 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 PLCB4Q15147 1175 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 LETM2Q2VYF4 491 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 PPM1JQ5JR12 505 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 PCNX4Q63HM2 1172 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 CABP7Q86V35 215 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 LRRC43Q8N309 656 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 GPR152Q8TDT2 470 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 BORCS6Q96GS4 357 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 PIGSQ96S52 555 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 MAD2L2Q9UI95 211 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 IRAK3Q9Y616 596 aa15.23■□□□□ 0.03
ABCD4-224ENST00000556119 A0A0D9SFI3 127 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 SRFP11831 508 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 DSC3Q14574 896 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 MTHFD1LQ6UB35 978 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 ZNF589Q86UQ0 364 aaPredicted RBP15.22■□□□□ 0.03
ABCD4-224ENST00000556119 NLRX1Q86UT6 975 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 VPS52Q8N1B4 723 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 FOXQ1Q9C009 403 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 SFXN1Q9H9B4 322 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 PARD6AQ9NPB6 346 aa15.22■□□□□ 0.03
ABCD4-224ENST00000556119 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
ABCD4-224ENST00000556119 GPR182O15218 404 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 BMS1Q14692 1282 aaKnown RBP15.21■□□□□ 0.03
ABCD4-224ENST00000556119 MCMDC2Q4G0Z9 681 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 FAM228AQ86W67 206 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 KIAA0319LQ8IZA0 1049 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 TMEM87AQ8NBN3 555 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 PJA1Q8NG27 643 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 COL26A1Q96A83 441 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 ARHGEF3Q9NR81 526 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 ZSWIM5Q9P217 1185 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 USP18Q9UMW8 372 aa15.21■□□□□ 0.03
ABCD4-224ENST00000556119 RALGAPA1Q6GYQ0 2036 aa15.21■□□□□ 0.02
ABCD4-224ENST00000556119 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 B4E1Z4 1266 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 HOXA2O43364 376 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 METAP2P50579 478 aaKnown RBP eCLIP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 TRAF1Q13077 416 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 CLLU1OSQ5K130 101 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 ODR4Q5SWX8 454 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 TMEM173Q86WV6 379 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 ZBTB44Q8NCP5 570 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 SECISBP2LQ93073 1101 aaKnown RBP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 GPRASP2Q96D09 838 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 PKD2L1Q9P0L9 805 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 FBXO4Q9UKT5 387 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 SMG5Q9UPR3 1016 aaKnown RBP15.2■□□□□ 0.02
ABCD4-224ENST00000556119 PCDHGA2Q9Y5H1 932 aa15.2■□□□□ 0.02
ABCD4-224ENST00000556119 COL4A3Q01955 1670 aa15.19■□□□□ 0.02
ABCD4-224ENST00000556119 CTSAP10619 480 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms