RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TBR1Q16650 682 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 PTPROQ16827 1216 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ABHD17CQ6PCB6 329 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 UBE2R2Q712K3 238 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 KRT26Q7Z3Y9 468 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 THNSL2Q86YJ6 484 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ZC3H7AQ8IWR0 971 aaKnown RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 PALM2Q8IXS6 379 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 Q8N1X5 172 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 ZCRB1Q8TBF4 217 aaKnown RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CHAC2Q8WUX2 184 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 AJUBAQ96IF1 538 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 TARS2Q9BW92 718 aaKnown RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CAAP1Q9H8G2 361 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 BARX1Q9HBU1 254 aaPredicted RBP2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CATSPERZQ9NTU4 200 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 RIC8BQ9NVN3 520 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 BTBD7Q9P203 1132 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 MAPRE3Q9UPY8 281 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 COQ6Q9Y2Z9 468 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 TSC22D4Q9Y3Q8 395 aa2.14□□□□□ -2.07
PRPF39-208ENST00000554785 CUL7Q14999 1698 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 ABCC10Q5T3U5 1492 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 CCDC66A2RUB6 948 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 RASSF10A6NK89 507 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 GSG1L2A8MUP6 293 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 CYP7B1O75881 506 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 NPTXRO95502 500 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 C4BPAP04003 597 aaKnown RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 JMJD7P0C870 316 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 KCNA6P17658 529 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 POU3F2P20265 443 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 IBSPP21815 317 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 CNGA1P29973 690 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 SOX5P35711 763 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 STAT3P40763 770 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 DNM2P50570 870 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 NEK4P51957 841 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 KRTAP10-9P60411 292 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 IL13RA1P78552 427 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF460Q14592 562 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 GPR19Q15760 415 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 RNF151Q2KHN1 245 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 CFAP100Q494V2 611 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 FAM47CQ5HY64 1035 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 TCTN3Q6NUS6 607 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 ZCCHC8Q6NZY4 707 aaKnown RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 CRIP3Q6Q6R5 217 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 LRSAM1Q6UWE0 723 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 ARHGEF18Q6ZSZ5 1173 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 PLEKHH3Q7Z736 793 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 DDX53Q86TM3 631 aaKnown RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 PPM1KQ8N3J5 372 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 Q8TCH9 128 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 SH3RF3Q8TEJ3 882 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 FBXW5Q969U6 566 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 GPATCH3Q96I76 525 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 PUS7Q96PZ0 661 aaKnown RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 LRRC37BQ96QE4 947 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 AMNQ9BXJ7 453 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 BRINP2Q9C0B6 783 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 SCAND2PQ9GZW5 306 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 KLC2Q9H0B6 622 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 JADE2Q9NQC1 790 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 SAMD15Q9P1V8 674 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 COL4A3BPQ9Y5P4 624 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 PPRC1Q5VV67 1664 aaKnown RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 GRIN2AQ12879 1464 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 GRIN2BQ13224 1484 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 UTRNP46939 3433 aa2.13□□□□□ -2.07
PRPF39-208ENST00000554785 PRG4Q92954 1404 aaPredicted RBP2.13□□□□□ -2.07
PRPF39-208ENST00000554785 FAM83GA6ND36 823 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 MATN2O00339 956 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 GSTA4O15217 222 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 MPIG6BO95866 241 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ADCY8P40145 1251 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 RRADP55042 308 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 ST5P78524 1137 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 HNRNPA0Q13151 305 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 TOP3AQ13472 1001 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 PCBP1Q15365 356 aaKnown RBP eCLIP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CT47A1Q5JQC4 288 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 PIK3R6Q5UE93 754 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 SLFN13Q68D06 897 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CDCA2Q69YH5 1023 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 LARP4Q71RC2 724 aaKnown RBP eCLIP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 DDX46Q7L014 1031 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 C16orf59Q7L2K0 433 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 RALYLQ86SE5 291 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CIR1Q86X95 450 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CISD2Q8N5K1 135 aaKnown RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 UBR7Q8N806 425 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 IGSF22Q8N9C0 903 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 LEO1Q8WVC0 666 aaPredicted RBP2.12□□□□□ -2.07
PRPF39-208ENST00000554785 WNK4Q96J92 1243 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 WRNIP1Q96S55 665 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 MTFR1LQ9H019 292 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 PCDH12Q9NPG4 1184 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 UCKL1Q9NWZ5 548 aa2.12□□□□□ -2.07
PRPF39-208ENST00000554785 CDC42EP3Q9UKI2 254 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms