RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 LOC102724159A0A0B4J2E5 919 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PWP2Q15269 919 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GLRA4Q5JXX5 417 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SPDYAQ5MJ70 313 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 FAM83BQ5T0W9 1011 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PMEPA1Q969W9 287 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM11Q96F44 468 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 A6NJR5 290 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AREL1O15033 823 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 MAP3K7O43318 606 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ATG16L1Q676U5 607 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ARMC9Q7Z3E5 817 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RDM1Q8NG50 284 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SAT2Q96F10 170 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KATNAL1Q9BW62 490 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM4Q9C037 500 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 C3orf18Q9UK00 162 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SOS2Q07890 1332 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SRGAP2O75044 1071 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GUCA1CO95843 209 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SRGAP2BP0DMP2 458 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CDC16Q13042 620 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF280BQ86YH2 543 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CNPY4Q8N129 248 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ATL2Q8NHH9 583 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 VPS11Q9H270 941 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 VCX3BQ9H321 246 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GPATCH2LQ9NWQ4 482 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SESN2P58004 480 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CEP78Q5JTW2 689 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 C8orf74Q6P047 294 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PRR23BQ6ZRT6 265 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PCDHB15Q9Y5E8 787 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 OTOL1A6NHN0 477 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PPP6R2O75170 966 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ADCY8P40145 1251 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CRKLP46109 303 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 HDLBPQ00341 1268 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 NYAP1Q6ZVC0 841 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CABP7Q86V35 215 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 MTMR8Q96EF0 704 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SAAL1Q96ER3 474 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ZMAT2Q96NC0 199 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SLC4A9Q96Q91 983 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 PLB1Q6P1J6 1458 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 AP3D1O14617 1153 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TP73O15350 636 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KCNJ6P48051 423 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC92Q53HC0 331 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 ISLR2Q6UXK2 745 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 KSR2Q6VAB6 950 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SLC26A7Q8TE54 656 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RHOBTB2Q9BYZ6 727 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 GLIS2Q9BZE0 524 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 RIMKLBQ9ULI2 386 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 TTC3P53804 2025 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 STATHP02808 62 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CHGBP05060 677 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CLCN6P51797 869 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 CHRNDQ07001 517 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 SLC9C1Q4G0N8 1177 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 MARK2Q7KZI7 788 aaKnown RBP3.54□□□□□ -1.84
SYNE2-212ENST00000554584 NACC2Q96BF6 587 aa3.54□□□□□ -1.84
SYNE2-212ENST00000554584 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GFPT2O94808 682 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 RIN1Q13671 783 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TNNI3KQ59H18 835 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CAMKK1Q8N5S9 505 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 THTPAQ9BU02 230 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GTPBP2Q9BX10 602 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FBRSQ9HAH7 460 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 POLG2Q9UHN1 485 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 RTL9Q8NET4 1388 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 TRIP11Q15643 1979 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L10C9JJH3 530 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DGKIO75912 1065 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 STX1BP61266 288 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ERAP2Q6P179 960 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SCUBE2Q9NQ36 999 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GULP1Q9UBP9 304 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 DDX3XO00571 662 aaKnown RBP eCLIP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 GPAA1O43292 621 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 PGK2P07205 417 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SPP2Q13103 211 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 SHROOM1Q2M3G4 852 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CEP68Q76N32 757 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 HOMEZQ8IX15 550 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ZSCAN18Q8TBC5 510 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 FAM217BQ9NTX9 383 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 UTP11Q9Y3A2 253 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 ACAT1P24752 427 aaKnown RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CERKLQ49MI3 558 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-212ENST00000554584 CACNA2D3Q8IZS8 1091 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 OR2W6PQ8NHA6 318 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 HEMGNQ9BXL5 484 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 MYH6P13533 1939 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 KCNK3O14649 394 aa3.53□□□□□ -1.84
SYNE2-212ENST00000554584 STX2P32856 288 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms