RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 AGO3Q9H9G7 860 aaKnown RBP26.01■■□□□ 1.75
NEK9-203ENST00000553945 TUFT1Q9NNX1 390 aa26.01■■□□□ 1.75
NEK9-203ENST00000553945 LRWD1Q9UFC0 647 aa26.01■■□□□ 1.75
NEK9-203ENST00000553945 SQORQ9Y6N5 450 aa26.01■■□□□ 1.75
NEK9-203ENST00000553945 ARID2Q68CP9 1835 aa26■■□□□ 1.75
NEK9-203ENST00000553945 MED24O75448 989 aa26■■□□□ 1.75
NEK9-203ENST00000553945 LYPLA2O95372 231 aa26■■□□□ 1.75
NEK9-203ENST00000553945 CD52P31358 61 aa26■■□□□ 1.75
NEK9-203ENST00000553945 PRPHP41219 470 aa26■■□□□ 1.75
NEK9-203ENST00000553945 DNM2P50570 870 aa26■■□□□ 1.75
NEK9-203ENST00000553945 DRP2Q13474 957 aa26■■□□□ 1.75
NEK9-203ENST00000553945 DTHD1Q6ZMT9 781 aa26■■□□□ 1.75
NEK9-203ENST00000553945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26■■□□□ 1.75
NEK9-203ENST00000553945 JPH2Q9BR39 696 aaPredicted RBP26■■□□□ 1.75
NEK9-203ENST00000553945 RAB34Q9BZG1 259 aa26■■□□□ 1.75
NEK9-203ENST00000553945 MSRAQ9UJ68 235 aa26■■□□□ 1.75
NEK9-203ENST00000553945 PPME1Q9Y570 386 aa26■■□□□ 1.75
NEK9-203ENST00000553945 MICAL3Q7RTP6 2002 aa26■■□□□ 1.75
NEK9-203ENST00000553945 PTPRSQ13332 1948 aa26■■□□□ 1.75
NEK9-203ENST00000553945 IGKV6-21A0A0C4DH24 114 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 STX6O43752 255 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 GPR32O75388 356 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 SPATA31C1P0DKV0 1188 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 CRYBB1P53674 252 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 POLGP54098 1239 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 NLRP11P59045 1033 aaKnown RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 ATP2C1P98194 919 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 PAK2Q13177 524 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 MKRN4PQ13434 485 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 RAB30Q15771 203 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 Q7L0L9 218 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 TMCO2Q7Z6W1 182 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 CATSPER3Q86XQ3 398 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 HERC6Q8IVU3 1022 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 SPRYD3Q8NCJ5 442 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 SLC7A3Q8WY07 619 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 CCDC43Q96MW1 224 aaKnown RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 OSMRQ99650 979 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 POLR3CQ9BUI4 534 aaPredicted RBP25.99■■□□□ 1.75
NEK9-203ENST00000553945 MTMR6Q9Y217 621 aa25.99■■□□□ 1.75
NEK9-203ENST00000553945 A0A087WWV3 80 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 AMHP03971 560 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 RFC5P40937 340 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 RESTQ13127 1097 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 PDIA5Q14554 519 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 IL17AQ16552 155 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 ZNF697Q5TEC3 545 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 EXOC8Q8IYI6 725 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 DEFB123Q8N688 67 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 PIGOQ8TEQ8 1089 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 TIFAQ96CG3 184 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 ZNF668Q96K58 619 aaPredicted RBP25.98■■□□□ 1.75
NEK9-203ENST00000553945 BMP2KQ9NSY1 1161 aaPredicted RBP25.98■■□□□ 1.75
NEK9-203ENST00000553945 ANKEF1Q9NU02 776 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 SUCLA2Q9P2R7 463 aaPredicted RBP25.98■■□□□ 1.75
NEK9-203ENST00000553945 PADI3Q9ULW8 664 aa25.98■■□□□ 1.75
NEK9-203ENST00000553945 RPS6KA5O75582 802 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 RPA1P27694 616 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 HAUS3Q68CZ6 603 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 ZNF710Q8N1W2 664 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 IGSF22Q8N9C0 903 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 TMEM40Q8WWA1 233 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 SCLT1Q96NL6 688 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 ZBED2Q9BTP6 218 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 ADAMTS10Q9H324 1103 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 DHX33Q9H6R0 707 aaKnown RBP25.97■■□□□ 1.75
NEK9-203ENST00000553945 YBX2Q9Y2T7 364 aaKnown RBP25.97■■□□□ 1.75
NEK9-203ENST00000553945 NOC2LQ9Y3T9 749 aaKnown RBP25.97■■□□□ 1.75
NEK9-203ENST00000553945 PCDHA11Q9Y5I1 949 aa25.97■■□□□ 1.75
NEK9-203ENST00000553945 CHD9Q3L8U1 2897 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 MYOGP15173 224 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 CCT6AP40227 531 aaKnown RBP25.96■■□□□ 1.75
NEK9-203ENST00000553945 GPC3P51654 580 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 NFX1Q12986 1120 aaKnown RBP25.96■■□□□ 1.75
NEK9-203ENST00000553945 POTEGQ6S5H5 508 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 MYOCDQ8IZQ8 938 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 NLRP7Q8WX94 980 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 FAM161BQ96MY7 647 aa25.96■■□□□ 1.75
NEK9-203ENST00000553945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.95■■□□□ 1.74
NEK9-203ENST00000553945 XRCC6P12956 609 aaKnown RBP eCLIP25.95■■□□□ 1.74
NEK9-203ENST00000553945 EMC2Q15006 297 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 FAM117BQ6P1L5 589 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 RHPN2Q8IUC4 686 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 SNX29Q8TEQ0 813 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 TMEM143Q96AN5 459 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 NACC1Q96RE7 527 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 NKX2-4Q9H2Z4 354 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 STK24Q9Y6E0 443 aa25.95■■□□□ 1.74
NEK9-203ENST00000553945 VWA3AA6NCI4 1184 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 PP2D1A8MPX8 630 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 TLL1O43897 1013 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 RARRES1P49788 294 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 SF3A1Q15459 793 aaKnown RBP25.94■■□□□ 1.74
NEK9-203ENST00000553945 ODR4Q5SWX8 454 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 FAM173BQ6P4H8 233 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 ERVK-5Q9HDB9 667 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 ST3GAL5Q9UNP4 418 aa25.94■■□□□ 1.74
NEK9-203ENST00000553945 GPR182O15218 404 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 GAS2O43903 313 aaKnown RBP25.93■■□□□ 1.74
NEK9-203ENST00000553945 UPP2O95045 317 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms