RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TMEM40Q8WWA1 233 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 AZI2Q9H6S1 392 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 PKD2L1Q9P0L9 805 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 IGSF9Q9P2J2 1179 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 OTOGLQ3ZCN5 2332 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 SALL3Q9BXA9 1300 aa15.86■□□□□ 0.13
PRPF39-204ENST00000553605 HOXA2O43364 376 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 CYTH3O43739 400 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 NARSO43776 548 aaKnown RBP15.85■□□□□ 0.13
PRPF39-204ENST00000553605 CFHP08603 1231 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 EPCAMP16422 314 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 MFAP1P55081 439 aaKnown RBP15.85■□□□□ 0.13
PRPF39-204ENST00000553605 SPECC1Q5M775 1068 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 ABI1Q8IZP0 508 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 SLC39A11Q8N1S5 342 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 LRRC43Q8N309 656 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 SUMF1Q8NBK3 374 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 CUL5Q93034 780 aa15.85■□□□□ 0.13
PRPF39-204ENST00000553605 ITGB5P18084 799 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 KLRC1P26715 233 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 GPR149Q86SP6 731 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 CABP7Q86V35 215 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 C1orf210Q8IVY1 113 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 FEZF2Q8TBJ5 459 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 SLC22A17Q8WUG5 538 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 KRT23Q9C075 422 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
PRPF39-204ENST00000553605 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.83■□□□□ 0.12
PRPF39-204ENST00000553605 MEIS2O14770 477 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 DCNP07585 359 aaKnown RBP15.83■□□□□ 0.12
PRPF39-204ENST00000553605 MTMR1Q13613 665 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 DSC3Q14574 896 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 GRM4Q14833 912 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 SEC23AQ15436 765 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 PLPPR4Q7Z2D5 763 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 KIAA0319LQ8IZA0 1049 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 TBC1D17Q9HA65 648 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 CA14Q9ULX7 337 aa15.83■□□□□ 0.12
PRPF39-204ENST00000553605 NT5C1B-RDH14C9J2C7 533 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 PIK3CDO00329 1044 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 MAFGO15525 162 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 METAP2P50579 478 aaKnown RBP eCLIP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 STAT5BP51692 787 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 GIT2Q14161 759 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 VARS2Q5ST30 1063 aaKnown RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 FAM228AQ86W67 206 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 VPS52Q8N1B4 723 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 PIBF1Q8WXW3 757 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 AUTS2Q8WXX7 1259 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 CNNM2Q9H8M5 875 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 SFXN1Q9H9B4 322 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 JPH1Q9HDC5 661 aaPredicted RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 DLGAP2Q9P1A6 1054 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 NCDNQ9UBB6 729 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 UBIAD1Q9Y5Z9 338 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 IRAK3Q9Y616 596 aa15.82■□□□□ 0.12
PRPF39-204ENST00000553605 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
PRPF39-204ENST00000553605 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 CRYBB1P53674 252 aaPredicted RBP15.81■□□□□ 0.12
PRPF39-204ENST00000553605 PDE1AP54750 535 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 NONOQ15233 471 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRPF39-204ENST00000553605 LETM2Q2VYF4 491 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 PHLDB3Q6NSJ2 640 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 DENND4AQ7Z401 1863 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 RSAD2Q8WXG1 361 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 ZBP1Q9H171 429 aa15.81■□□□□ 0.12
PRPF39-204ENST00000553605 SPTBN2O15020 2390 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 FANCMQ8IYD8 2048 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 PRR5-ARHGAP8B1AHC4 643 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 BCAR1P56945 870 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 ARHGAP8P85298 464 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 IMMTQ16891 758 aaKnown RBP15.8■□□□□ 0.12
PRPF39-204ENST00000553605 KIZQ2M2Z5 673 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 PPFIBP1Q86W92 1011 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 SLC44A3Q8N4M1 653 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 BORCS6Q96GS4 357 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 OSMRQ99650 979 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 JADE2Q9NQC1 790 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
PRPF39-204ENST00000553605 CDV3Q9UKY7 258 aaKnown RBP15.8■□□□□ 0.12
PRPF39-204ENST00000553605 CHD6Q8TD26 2715 aa15.8■□□□□ 0.12
PRPF39-204ENST00000553605 DCDC2BA2VCK2 349 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 ADRB1P08588 477 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 CTSAP10619 480 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 SRFP11831 508 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 ZSCAN20P17040 1043 aaPredicted RBP15.79■□□□□ 0.12
PRPF39-204ENST00000553605 SLC26A2P50443 739 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 ACTR2P61160 394 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 CLLU1OSQ5K130 101 aa15.79■□□□□ 0.12
PRPF39-204ENST00000553605 ECHDC2Q86YB7 292 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms