RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 MCTP2Q6DN12 878 aa13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 LRRC43Q8N309 656 aa13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 OSMRQ99650 979 aa13.35□□□□□ -0.27
HNRNPC-206ENST00000553444 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 ZBTB42B2RXF5 422 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 HOXA2O43364 376 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 CCNE2O96020 404 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 IGHDP01880 384 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 ID4P47928 161 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 CRYBB1P53674 252 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 KRT17Q04695 432 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 SMC1AQ14683 1233 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 ZDHHC14Q8IZN3 488 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 MRPL43Q8N983 215 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 AGO4Q9HCK5 861 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-206ENST00000553444 COL1A2P08123 1366 aa13.33□□□□□ -0.27
HNRNPC-206ENST00000553444 DCHS1Q96JQ0 3298 aa13.33□□□□□ -0.27
HNRNPC-206ENST00000553444 MYH6P13533 1939 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 BACH1O14867 736 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 GPR32O75388 356 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 C22orf31O95567 290 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 MTHFRP42898 656 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 CLCN5P51795 746 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 ZNF484Q5JVG2 852 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 ABHD15Q6UXT9 468 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 CCDC60Q8IWA6 550 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 SLC39A11Q8N1S5 342 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 MFSD1Q9H3U5 465 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 SPG21Q9NZD8 308 aa13.33□□□□□ -0.28
HNRNPC-206ENST00000553444 PLXNA3P51805 1871 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 MEIS1O00470 390 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 RXRAP19793 462 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 ATP4AP20648 1035 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 AAMPQ13685 434 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 FAM160B1Q5W0V3 765 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 KIAA1841Q6NSI8 718 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 ABI1Q8IZP0 508 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 VPS13AQ96RL7 3174 aa13.32□□□□□ -0.28
HNRNPC-206ENST00000553444 EP300Q09472 2414 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 DDX39AO00148 427 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 PRC1O43663 620 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 VTNP04004 478 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 CLLU1OSQ5K130 101 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 TMTC3Q6ZXV5 915 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 ANO3Q9BYT9 981 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 ZNF302Q9NR11 478 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 KIAA1671Q9BY89 1806 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 DOCK5Q9H7D0 1870 aa13.31□□□□□ -0.28
HNRNPC-206ENST00000553444 PI15O43692 258 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 EOMESO95936 686 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CALM1P0DP23 149 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CALM2P0DP24 149 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CALM3P0DP25 149 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 NPR3P17342 541 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 AOC1P19801 751 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CHMLP26374 656 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 TTC22Q5TAA0 569 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 SWSAP1Q6NVH7 229 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 KANK3Q6NY19 840 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 MIS18BP1Q6P0N0 1132 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 RAB11FIP4Q86YS3 637 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 TEX2Q8IWB9 1127 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CCDC105Q8IYK2 499 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 CCDC82Q8N4S0 544 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 FLCNQ8NFG4 579 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
HNRNPC-206ENST00000553444 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms