RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 LPXNO60711 386 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 MAFO75444 373 aaPredicted RBP21.65■■□□□ 1.06
PTCH1-227ENST00000553256 LYPLA2O95372 231 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 VTNP04004 478 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 POU3F3P20264 500 aaPredicted RBP21.65■■□□□ 1.06
PTCH1-227ENST00000553256 CRYBB1P53674 252 aaPredicted RBP21.65■■□□□ 1.06
PTCH1-227ENST00000553256 ORC2Q13416 577 aaPredicted RBP21.65■■□□□ 1.06
PTCH1-227ENST00000553256 CALCRLQ16602 461 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 MYOCDQ8IZQ8 938 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 TSPYL2Q9H2G4 693 aaPredicted RBP21.65■■□□□ 1.06
PTCH1-227ENST00000553256 LOXHD1Q8IVV2 1947 aa21.65■■□□□ 1.06
PTCH1-227ENST00000553256 MGEA5O60502 916 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 TRAPPC10P48553 1259 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 KIZQ2M2Z5 673 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 TMEM266Q2M3C6 531 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 FAM43BQ6ZT52 329 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-227ENST00000553256 FAM228AQ86W67 206 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 FAM184AQ8NB25 1140 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 ZNF689Q96CS4 500 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-227ENST00000553256 DYDC2Q96IM9 177 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 LXNQ9BS40 222 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 TTC12Q9H892 705 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-227ENST00000553256 SEPT9Q9UHD8 586 aaPredicted RBP21.64■■□□□ 1.05
PTCH1-227ENST00000553256 PCDHA12Q9UN75 941 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 VCANP13611 3396 aa21.64■■□□□ 1.05
PTCH1-227ENST00000553256 ZBTB39O15060 712 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
PTCH1-227ENST00000553256 FOSL2P15408 326 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 GPC3P51654 580 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 NPEPPSP55786 919 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 ERVK-21P61565 698 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 DSC3Q14574 896 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 MTERF2Q49AM1 385 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 PLA2G4FQ68DD2 849 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 METTL13Q8N6R0 699 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 OSMRQ99650 979 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 EIF2AK1Q9BQI3 630 aaKnown RBP21.63■■□□□ 1.05
PTCH1-227ENST00000553256 FTHL17Q9BXU8 183 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 DHX33Q9H6R0 707 aaKnown RBP21.63■■□□□ 1.05
PTCH1-227ENST00000553256 CYP26B1Q9NR63 512 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 INSL6Q9Y581 213 aa21.63■■□□□ 1.05
PTCH1-227ENST00000553256 M0QZ92 97 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 SPATA31C1P0DKV0 1188 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 GJB2P29033 226 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 MCM7P33993 719 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 NLRP11P59045 1033 aaKnown RBP21.62■■□□□ 1.05
PTCH1-227ENST00000553256 TBC1D8BQ0IIM8 1120 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 NBR1Q14596 966 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 NCAPH2Q6IBW4 605 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 FAM117BQ6P1L5 589 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 ZNF710Q8N1W2 664 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 ST3GAL5Q9UNP4 418 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 PPME1Q9Y570 386 aa21.62■■□□□ 1.05
PTCH1-227ENST00000553256 DDX11L8A8MPP1 907 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 RFXAPO00287 272 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 TXKP42681 527 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 PAK2Q13177 524 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 CTTNQ14247 550 aaKnown RBP21.61■■□□□ 1.05
PTCH1-227ENST00000553256 ZNF174Q15697 407 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 TTC38Q5R3I4 469 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 ZSWIM4Q9H7M6 989 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
PTCH1-227ENST00000553256 POTEMA6NI47 508 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 RPS6KA5O75582 802 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 TMOD1P28289 359 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 YWHABP31946 246 aaKnown RBP21.6■■□□□ 1.05
PTCH1-227ENST00000553256 FAM189BP81408 668 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 CYP4A11Q02928 519 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 MAFAQ8NHW3 353 aaPredicted RBP21.6■■□□□ 1.05
PTCH1-227ENST00000553256 PPP1R16BQ96T49 567 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 ZBED2Q9BTP6 218 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 CERS4Q9HA82 394 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 SUGCTQ9HAC7 445 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 RGS18Q9NS28 235 aa21.6■■□□□ 1.05
PTCH1-227ENST00000553256 C9IYK1 514 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 DKC1O60832 514 aaKnown RBP eCLIP21.59■■□□□ 1.05
PTCH1-227ENST00000553256 DGKIO75912 1065 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 DARSP14868 501 aaKnown RBP21.59■■□□□ 1.05
PTCH1-227ENST00000553256 ATP2B1P20020 1258 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 EIF4BP23588 611 aaKnown RBP21.59■■□□□ 1.05
PTCH1-227ENST00000553256 NEK9Q8TD19 979 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 MAP7D2Q96T17 732 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 XPNPEP1Q9NQW7 623 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 AKT3Q9Y243 479 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 GINS2Q9Y248 185 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 PCDHB6Q9Y5E3 794 aa21.59■■□□□ 1.05
PTCH1-227ENST00000553256 PRRC2BQ5JSZ5 2229 aaKnown RBP21.58■■□□□ 1.05
PTCH1-227ENST00000553256 UPP2O95045 317 aa21.58■■□□□ 1.05
PTCH1-227ENST00000553256 OR52Z1P0C646 297 aa21.58■■□□□ 1.05
PTCH1-227ENST00000553256 TGS1Q96RS0 853 aaKnown RBP21.58■■□□□ 1.05
PTCH1-227ENST00000553256 C17orf80Q9BSJ5 609 aa21.58■■□□□ 1.05
PTCH1-227ENST00000553256 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.58■■□□□ 1.05
PTCH1-227ENST00000553256 MTCH2Q9Y6C9 303 aa21.58■■□□□ 1.05
PTCH1-227ENST00000553256 GPR182O15218 404 aa21.57■■□□□ 1.04
PTCH1-227ENST00000553256 MARCH6O60337 910 aa21.57■■□□□ 1.04
PTCH1-227ENST00000553256 MED24O75448 989 aa21.57■■□□□ 1.04
PTCH1-227ENST00000553256 FXR2P51116 673 aaKnown RBP eCLIP21.57■■□□□ 1.04
PTCH1-227ENST00000553256 NFX1Q12986 1120 aaKnown RBP21.57■■□□□ 1.04
PTCH1-227ENST00000553256 GRB10Q13322 594 aa21.57■■□□□ 1.04
PTCH1-227ENST00000553256 IL17AQ16552 155 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms