RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MED24O75448 989 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 FBXO47Q5MNV8 452 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 EFCAB12Q6NXP0 572 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 SLC7A3Q8WY07 619 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 APBB2Q92870 758 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 CEP170P1Q96L14 293 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 FTOQ9C0B1 505 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 ANKEF1Q9NU02 776 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 CHD9Q3L8U1 2897 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 KIAA1671Q9BY89 1806 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 XRCC6P12956 609 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 CCT6AP40227 531 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 NPEPPSP55786 919 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 LPIN1Q14693 890 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 EMC2Q15006 297 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 IL17AQ16552 155 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 LRRC71Q8N4P6 559 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 SEPT8Q92599 483 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 IFIH1Q9BYX4 1025 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 DHX33Q9H6R0 707 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 AKT3Q9Y243 479 aa13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
TRAFD1-209ENST00000552896 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 SLC26A4O43511 780 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 F13A1P00488 732 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 VTNP04004 478 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 GHRP10912 638 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 RARRES1P49788 294 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 DNM2P50570 870 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 PTPAQ15257 358 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 AK8Q96MA6 479 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 NACC1Q96RE7 527 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 SUGCTQ9HAC7 445 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 CXXC1Q9P0U4 656 aaPredicted RBP13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 SLC4A7Q9Y6M7 1214 aa13.07□□□□□ -0.32
TRAFD1-209ENST00000552896 COL4A4P53420 1690 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 PP2D1A8MPX8 630 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 GPR32O75388 356 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 DGAT1O75907 488 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 LONP1P36776 959 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 KCNJ6P48051 423 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 CRYBB1P53674 252 aaPredicted RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 WDR5P61964 334 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 CDC42EP1Q00587 391 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 PKP1Q13835 747 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 IKBKEQ14164 716 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 KIZQ2M2Z5 673 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 TCTN1Q2MV58 587 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 HYIQ5T013 277 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 FAM173BQ6P4H8 233 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 DBF4BQ8NFT6 615 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 MTRQ99707 1265 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 ATP6V0A4Q9HBG4 840 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 TRANK1O15050 2925 aa13.06□□□□□ -0.32
TRAFD1-209ENST00000552896 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 ZBTB39O15060 712 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 GPC3P51654 580 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 PAK2Q13177 524 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 DRP2Q13474 957 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 ODR4Q5SWX8 454 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 ZNF410Q86VK4 478 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 KCTD17Q8N5Z5 321 aa13.05□□□□□ -0.32
TRAFD1-209ENST00000552896 TCP11Q8WWU5 503 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms