RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-218ENST00000552839 CYFIP1Q7L576 1253 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 ZNF689Q96CS4 500 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-218ENST00000552839 GPRASP2Q96D09 838 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 MSLNLQ96KJ4 702 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 ALG13Q9NP73 1137 aaKnown RBP12.81□□□□□ -0.36
TMEM116-218ENST00000552839 CIZ1Q9ULV3 898 aaPredicted RBP12.81□□□□□ -0.36
TMEM116-218ENST00000552839 TELO2Q9Y4R8 837 aa12.81□□□□□ -0.36
TMEM116-218ENST00000552839 TMEM221A6NGB7 291 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 M0R296 226 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 M0R2N6 131 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 ENPP3O14638 875 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 ADAMTS3O15072 1205 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 NEMFO60524 1076 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 TDP2O95551 362 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 EYA4O95677 639 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 ICAM3P32942 547 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 MCM7P33993 719 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
TMEM116-218ENST00000552839 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 CALCRLQ16602 461 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 LMBR1Q8WVP7 490 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 PBXIP1Q96AQ6 731 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 GPR20Q99678 358 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 ZNF577Q9BSK1 485 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 CHMP5Q9NZZ3 219 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 PLAGL2Q9UPG8 496 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
TMEM116-218ENST00000552839 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 DGKIO75912 1065 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 BMP15O95972 392 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 CYP3A4P08684 503 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 DNAJB1P25685 340 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 NDUFV1P49821 464 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 PTPN5P54829 565 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 MGAT3Q09327 533 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 TCF15Q12870 199 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 RESTQ13127 1097 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 BTG3Q14201 252 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 NEDD9Q14511 834 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 LPIN1Q14693 890 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 ZNF174Q15697 407 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 EARS2Q5JPH6 523 aaKnown RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 UTP14CQ5TAP6 766 aaKnown RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 MOXD1Q6UVY6 613 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 METTL7BQ6UX53 244 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 ADGRD2Q7Z7M1 963 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
TMEM116-218ENST00000552839 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
TMEM116-218ENST00000552839 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
TMEM116-218ENST00000552839 MAFGO15525 162 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 GAS7O60861 476 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 BRD1O95696 1058 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 ITGB1P05556 798 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 ZXDAP98168 799 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 SP4Q02446 784 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
TMEM116-218ENST00000552839 STK38Q15208 465 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
TMEM116-218ENST00000552839 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 SMRP1Q8NCR6 262 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 SPPL3Q8TCT6 385 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 P2RX5Q93086 422 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 TEKT3Q9BXF9 490 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 CLEC1BQ9P126 229 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
TMEM116-218ENST00000552839 FAM86B1E9PN63 330 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 FAM86B2P0C5J1 330 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 OR52Z1P0C646 297 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 CIITAP33076 1130 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 KRT85P78386 507 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 PKP1Q13835 747 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 NBR1Q14596 966 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 Q4G0T1 1027 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 FBXO47Q5MNV8 452 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 EFHBQ8N7U6 833 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 PRRX2Q99811 253 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
TMEM116-218ENST00000552839 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
TMEM116-218ENST00000552839 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms