RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 DSC3Q14574 896 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 KCNT2Q6UVM3 1135 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 TRAPPC12Q8WVT3 735 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 CFAP47Q6ZTR5 3102 aa13.06□□□□□ -0.32
SUPT16H-202ENST00000552829 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 CHD8Q9HCK8 2581 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 WEE2P0C1S8 567 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 FGFR1P11362 822 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 RARS2Q5T160 578 aaKnown RBP13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 TMC7Q7Z402 723 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 C12orf76Q8N812 135 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 KRT23Q9C075 422 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 TMEM117Q9H0C3 514 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 ST3GAL5Q9UNP4 418 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
SUPT16H-202ENST00000552829 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 DENND3A2RUS2 1198 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 PPM1AP35813 382 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 TDGQ13569 410 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 PLPPR4Q7Z2D5 763 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 KIAA0319LQ8IZA0 1049 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 ZNF558Q96NG5 402 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 CNNM2Q9H8M5 875 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 ATP6V0A4Q9HBG4 840 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
SUPT16H-202ENST00000552829 USP24Q9UPU5 2620 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 PBX3P40426 434 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 KRT17Q04695 432 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 TROAPQ12815 778 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 MTHFD1LQ6UB35 978 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 CYB5R4Q7L1T6 521 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 SLC22A17Q8WUG5 538 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 DZANK1Q9NVP4 752 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 R4GN57 208 aa13.03□□□□□ -0.32
SUPT16H-202ENST00000552829 BAHCC1Q9P281 2608 aa13.02□□□□□ -0.32
SUPT16H-202ENST00000552829 GPR182O15218 404 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 MAFGO15525 162 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 SDSP20132 328 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 KLRC1P26715 233 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 FAM228AQ86W67 206 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 SIX5Q8N196 739 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 RUBCNQ92622 972 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 DSCC1Q9BVC3 393 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 SENP2Q9HC62 589 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 JADE2Q9NQC1 790 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 IRAK3Q9Y616 596 aa13.02□□□□□ -0.33
SUPT16H-202ENST00000552829 KRBA1A5PL33 1030 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 ATG7O95352 703 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 CXCL14O95715 111 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 EPCAMP16422 314 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 DCLK2Q8N568 766 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 SUMF1Q8NBK3 374 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 CUL5Q93034 780 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 AZI2Q9H6S1 392 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 DLGAP2Q9P1A6 1054 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 WNT16Q9UBV4 365 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 MYH9P35579 1960 aaKnown RBP13.01□□□□□ -0.33
SUPT16H-202ENST00000552829 NFASCO94856 1347 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 IGKV6D-21A0A0A0MT36 114 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 HOXA2O43364 376 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 STAT5BP51692 787 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
SUPT16H-202ENST00000552829 MTMR1Q13613 665 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 RSPO4Q2I0M5 234 aaPredicted RBP13□□□□□ -0.33
SUPT16H-202ENST00000552829 CLLU1OSQ5K130 101 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 GPR149Q86SP6 731 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 LRRC43Q8N309 656 aa13□□□□□ -0.33
SUPT16H-202ENST00000552829 ACSF2Q96CM8 615 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms