RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 FEM1BQ9UK73 627 aa8.89□□□□□ -0.99
RAB3IP-215ENST00000551641 RIPK3Q9Y572 518 aa8.89□□□□□ -0.99
RAB3IP-215ENST00000551641 PCDHGC5Q9Y5F6 944 aa8.89□□□□□ -0.99
RAB3IP-215ENST00000551641 BTNL10A8MVZ5 291 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 MEIS2O14770 477 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 AOC2O75106 756 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 ZBED4O75132 1171 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 MED24O75448 989 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 CLSTN1O94985 981 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 SNAPC2Q13487 334 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 NAB2Q15742 525 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 SLC18A3Q16572 532 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 Q4G0T1 1027 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 HAUS3Q68CZ6 603 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 LEKR1Q6ZMV7 388 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 SAPCD2Q86UD0 394 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 GPBP1Q86WP2 473 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 NCAPG2Q86XI2 1143 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 LSM14BQ9BX40 385 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 TRAF3IP3Q9Y228 551 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 C19orf81C9J6K1 198 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 NFIBO00712 420 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 SORBS3O60504 671 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 COG2Q14746 738 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 NOL9Q5SY16 702 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 GSPT2Q8IYD1 628 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 AFAP1L1Q8TED9 768 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 HDAC7Q8WUI4 952 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 LPAR1Q92633 364 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 LENG9Q96B70 501 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 SH3GL2Q99962 352 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 CRACR2AQ9BSW2 395 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 ASCC2Q9H1I8 757 aaPredicted RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 LUC7LQ9NQ29 371 aaKnown RBP8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 PLCB1Q9NQ66 1216 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 PKD2L1Q9P0L9 805 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 PPP1R9AQ9ULJ8 1098 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 ATP8B3O60423 1300 aa8.88□□□□□ -0.99
RAB3IP-215ENST00000551641 PDHXO00330 501 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 MARCH6O60337 910 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 PHACTR2O75167 634 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 GGCXP38435 758 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 POLR2FP61218 127 aaKnown RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 PPIL2Q13356 520 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 TDRD12Q587J7 1177 aaKnown RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 HERC4Q5GLZ8 1057 aaPredicted RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 EMBQ6PCB8 327 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 ANKRD13CQ8N6S4 541 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 BRI3BPQ8WY22 251 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 CAVIN3Q969G5 261 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 NLRC4Q9NPP4 1024 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 STIM2Q9P246 746 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 STK24Q9Y6E0 443 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 NPHP3-ACAD11A0A0J9YXS1 232 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 GRID2IPA4D2P6 1211 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 SPDYE16A6NNV3 312 aaPredicted RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 BTBD19C9JJ37 291 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 VWA5AO00534 786 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 SHOX2O60902 331 aaPredicted RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 RPA1P27694 616 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 PAFAH1B1P43034 410 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 EPHB4P54760 987 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 NNTQ13423 1086 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 GIT2Q14161 759 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 BMT2Q1RMZ1 405 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 SPRYD7Q5W111 196 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 RGMBQ6NW40 437 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 SLC30A10Q6XR72 485 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 CATSPERGQ6ZRH7 1159 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 FRMD5Q7Z6J6 570 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 CATSPER3Q86XQ3 398 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 NELFCDQ8IXH7 590 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 SYT2Q8N9I0 419 aaPredicted RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 RBM46Q8TBY0 533 aaKnown RBP8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
RAB3IP-215ENST00000551641 TMEM88BA6NKF7 163 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CES2O00748 559 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CETN3O15182 167 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 NCK2O43639 380 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 SSBP05455 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 SPATA31C1P0DKV0 1188 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 ERCC3P19447 782 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CIITAP33076 1130 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 SREBF1P36956 1147 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 ARHGAP4P98171 946 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 ADAM9Q13443 819 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 TMEM132BQ14DG7 1078 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CFAP221Q4G0U5 840 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CCDC181Q5TID7 509 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 LRRC31Q6UY01 552 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 FAM160B2Q86V87 743 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 KCTD17Q8N5Z5 321 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 TBC1D7Q9P0N9 293 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 BTBD7Q9P203 1132 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
RAB3IP-215ENST00000551641 FBXL5Q9UKA1 691 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms