RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 C4orf32Q8N8J7 132 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 TET1Q8NFU7 2136 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 PSPC1Q8WXF1 523 aaKnown RBP11.19□□□□□ -0.62
PFDN5-213ENST00000550964 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 TIPINQ9BVW5 301 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 IFIH1Q9BYX4 1025 aaKnown RBP11.19□□□□□ -0.62
PFDN5-213ENST00000550964 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
PFDN5-213ENST00000550964 FAM49AQ9H0Q0 323 aaPredicted RBP11.19□□□□□ -0.62
PFDN5-213ENST00000550964 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 SUGCTQ9HAC7 445 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 MYH11P35749 1972 aa11.19□□□□□ -0.62
PFDN5-213ENST00000550964 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 IGKV6-21A0A0C4DH24 114 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 ZBTB42B2RXF5 422 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 RPS6KA5O75582 802 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 SCP2P22307 547 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 CYP4A11Q02928 519 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 POU5F1BQ06416 359 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 OTOP2Q7RTS6 562 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 TRMT1LQ7Z2T5 733 aaKnown RBP11.18□□□□□ -0.62
PFDN5-213ENST00000550964 SNX29Q8TEQ0 813 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 GJA10Q969M2 543 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 MTRQ99707 1265 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
PFDN5-213ENST00000550964 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 KCND2Q9NZV8 630 aa11.18□□□□□ -0.62
PFDN5-213ENST00000550964 ARHGEF35A5YM69 484 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 POTEMA6NI47 508 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 NBNO60934 754 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CHRNA1P02708 482 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CTSHP09668 335 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 STAG3L1P0CL83 205 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ZSCAN22P10073 491 aaPredicted RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ACRP10323 421 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 SKIP12755 728 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ZSCAN20P17040 1043 aaPredicted RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ABCD1P33897 745 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 MGAT3Q09327 533 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CTTNQ14247 550 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 HIC1Q14526 733 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 SF3A1Q15459 793 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 UGCGQ16739 394 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 RUFY4Q6ZNE9 571 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 C16orf59Q7L2K0 433 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CATSPER3Q86XQ3 398 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 DBF4BQ8NFT6 615 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 PPP1R13LQ8WUF5 828 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CHST12Q9NRB3 414 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 C1orf112Q9NSG2 853 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 RGL1Q9NZL6 768 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 SUCLA2Q9P2R7 463 aaPredicted RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 CCDC39Q9UFE4 941 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
PFDN5-213ENST00000550964 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
PFDN5-213ENST00000550964 SIP14410 1827 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 STBD1O95210 358 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 YEATS4O95619 227 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 PHKA2P46019 1235 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 RARRES1P49788 294 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 NLRP11P59045 1033 aaKnown RBP11.16□□□□□ -0.62
PFDN5-213ENST00000550964 NUCB2P80303 420 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 RESTQ13127 1097 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 EMC2Q15006 297 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 C9orf50Q5SZB4 431 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 SRGAP1Q7Z6B7 1085 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 KIFAP3Q92845 792 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 C17orf75Q9HAS0 396 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 INSL6Q9Y581 213 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 COL4A3BPQ9Y5P4 624 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 GBF1Q92538 1859 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 TTC3P53804 2025 aa11.16□□□□□ -0.62
PFDN5-213ENST00000550964 DENND3A2RUS2 1198 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 HOXA2O43364 376 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 PPP6R2O75170 966 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 EYA4O95677 639 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 F13A1P00488 732 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 SPATA31C1P0DKV0 1188 aa11.15□□□□□ -0.62
PFDN5-213ENST00000550964 GHRP10912 638 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms