RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PEX11GQ96HA9 241 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 ZNF496Q96IT1 587 aaPredicted RBP6.48□□□□□ -1.37
SCAF11-214ENST00000550893 PWWP2AQ96N64 755 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 EPN3Q9H201 632 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 SIT1Q9Y3P8 196 aa6.48□□□□□ -1.37
SCAF11-214ENST00000550893 A0A1B0GUL6 1792 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 MEFVO15553 781 aaPredicted RBP6.47□□□□□ -1.37
SCAF11-214ENST00000550893 RPS6KA4O75676 772 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 CPP00450 1065 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 ASGR2P07307 311 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 BMP7P18075 431 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 KCNA3P22001 575 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 VMACQ2NL98 169 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 DENND5AQ6IQ26 1287 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 TMEM145Q8NBT3 493 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 DIO2Q92813 273 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 THUMPD2Q9BTF0 503 aaKnown RBP6.47□□□□□ -1.37
SCAF11-214ENST00000550893 NUDT5Q9UKK9 219 aa6.47□□□□□ -1.37
SCAF11-214ENST00000550893 COL4A5P29400 1685 aa6.46□□□□□ -1.37
SCAF11-214ENST00000550893 A0A1W2PQU0 124 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 C22orf46C9J442 243 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 AGRPO00253 132 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 HSP90AB1P08238 724 aaKnown RBP6.46□□□□□ -1.38
SCAF11-214ENST00000550893 NCAM1P13591 858 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 PMLP29590 882 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 MC3RP41968 323 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 PRELPP51888 382 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
SCAF11-214ENST00000550893 PPP2R2AP63151 447 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 RAB33AQ14088 237 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 MCM10Q7L590 875 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 PPIL6Q8IXY8 311 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 RNF38Q9H0F5 515 aa6.46□□□□□ -1.38
SCAF11-214ENST00000550893 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.38
SCAF11-214ENST00000550893 POLRMTO00411 1230 aaKnown RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 TRIM13O60858 407 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 MMP10P09238 476 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 INHBBP09529 407 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 LCP1P13796 627 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 FPR2P25090 351 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 TM4SF1P30408 202 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 EIF5P55010 431 aaKnown RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 FOXO4P98177 505 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 DDX10Q13206 875 aaKnown RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 KCNAB2Q13303 367 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 SLC9A5Q14940 896 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 C1orf141Q5JVX7 400 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 ACBD5Q5T8D3 534 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 ZNF790Q6PG37 636 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 TTLL10Q6ZVT0 673 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 CEP68Q76N32 757 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
SCAF11-214ENST00000550893 PRKRIP1Q9H875 184 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-214ENST00000550893 STK10O94804 968 aaKnown RBP6.44□□□□□ -1.38
SCAF11-214ENST00000550893 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
SCAF11-214ENST00000550893 BCL6P41182 706 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-214ENST00000550893 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
SCAF11-214ENST00000550893 TESK1Q15569 626 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 SLC35F1Q5T1Q4 408 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 NLRP10Q86W26 655 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 PARD6AQ9NPB6 346 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 MYBBP1AQ9BQG0 1328 aaKnown RBP6.44□□□□□ -1.38
SCAF11-214ENST00000550893 ADAMTSL1Q8N6G6 1762 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 DUOX1Q9NRD9 1551 aa6.44□□□□□ -1.38
SCAF11-214ENST00000550893 SGSM2O43147 1006 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 CAMTA2O94983 1202 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-214ENST00000550893 LTBRP36941 435 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.38
SCAF11-214ENST00000550893 NFIXQ14938 502 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 B3GNT8Q7Z7M8 397 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 DCP2Q8IU60 420 aaKnown RBP6.43□□□□□ -1.38
SCAF11-214ENST00000550893 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 TP53I13Q8NBR0 393 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-214ENST00000550893 TRMT2BQ96GJ1 504 aaKnown RBP6.43□□□□□ -1.38
SCAF11-214ENST00000550893 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 IER2Q9BTL4 223 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 TRIM55Q9BYV6 548 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 ZCCHC4Q9H5U6 513 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 CD2APQ9Y5K6 639 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 X6R8D5 127 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 SPEF2Q9C093 1822 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 ABCC12Q96J65 1359 aa6.43□□□□□ -1.38
SCAF11-214ENST00000550893 FFAR3O14843 346 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 MYO1BO43795 1136 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 A1BGP04217 495 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 GTF2A2P52657 109 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 MAP4K2Q12851 820 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 NFE2L2Q16236 605 aa6.42□□□□□ -1.38
SCAF11-214ENST00000550893 KRT24Q2M2I5 525 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms