RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SEPT8Q92599 483 aa15.35■□□□□ 0.05
TROAP-213ENST00000550709 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
TROAP-213ENST00000550709 POLR3CQ9BUI4 534 aaPredicted RBP15.35■□□□□ 0.05
TROAP-213ENST00000550709 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
TROAP-213ENST00000550709 TUFT1Q9NNX1 390 aa15.35■□□□□ 0.05
TROAP-213ENST00000550709 LAMA2P24043 3122 aaKnown RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 LYPLA2O95372 231 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 BMP15O95972 392 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 ZSCAN22P10073 491 aaPredicted RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 RPA1P27694 616 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 MARCKSP29966 332 aaPredicted RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 CD52P31358 61 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 DNM2P50570 870 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 FXR1P51114 621 aaKnown RBP eCLIP15.34■□□□□ 0.05
TROAP-213ENST00000550709 NLRP11P59045 1033 aaKnown RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 IKBKEQ14164 716 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 KRT79Q5XKE5 535 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 HAUS3Q68CZ6 603 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 LINC01465Q8N7H1 131 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 SLC7A3Q8WY07 619 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 OSMRQ99650 979 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 AGO3Q9H9G7 860 aaKnown RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 ANKEF1Q9NU02 776 aa15.34■□□□□ 0.05
TROAP-213ENST00000550709 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 DAXXQ9UER7 740 aaPredicted RBP15.34■□□□□ 0.05
TROAP-213ENST00000550709 TRIP12Q14669 1992 aaPredicted RBP15.33■□□□□ 0.05
TROAP-213ENST00000550709 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
TROAP-213ENST00000550709 RFC5P40937 340 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 KCNJ6P48051 423 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 EMC2Q15006 297 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 ECM1Q16610 540 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 ARL6IP4Q66PJ3 421 aaKnown RBP15.33■□□□□ 0.04
TROAP-213ENST00000550709 TSHZ1Q6ZSZ6 1077 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 USP28Q96RU2 1077 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 PLIN2Q99541 437 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 JPH2Q9BR39 696 aaPredicted RBP15.33■□□□□ 0.04
TROAP-213ENST00000550709 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
TROAP-213ENST00000550709 KIAA1024Q9UPX6 916 aa15.33■□□□□ 0.04
TROAP-213ENST00000550709 IGKV6-21A0A0C4DH24 114 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 ABHD14A-ACY1A0A1B0GW23 586 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 USO1O60763 962 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 GPR32O75388 356 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 BAIAP3O94812 1187 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 RARRES1P49788 294 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 RABGGTBP53611 331 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 CRYBB1P53674 252 aaPredicted RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 WDR5P61964 334 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 GRIN1Q05586 938 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 NFX1Q12986 1120 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 PAK2Q13177 524 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 PTPAQ15257 358 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
TROAP-213ENST00000550709 MAEAQ7L5Y9 396 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 TMCO2Q7Z6W1 182 aaPredicted RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 RHPN2Q8IUC4 686 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 KSR1Q8IVT5 923 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 TMEM40Q8WWA1 233 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 MMTAG2Q9BU76 263 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 ADAMTS10Q9H324 1103 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 DHX33Q9H6R0 707 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 NOC2LQ9Y3T9 749 aaKnown RBP15.32■□□□□ 0.04
TROAP-213ENST00000550709 PPME1Q9Y570 386 aa15.32■□□□□ 0.04
TROAP-213ENST00000550709 ARHGEF35A5YM69 484 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 CSDE1O75534 798 aaKnown RBP15.31■□□□□ 0.04
TROAP-213ENST00000550709 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 F13A1P00488 732 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 XRCC6P12956 609 aaKnown RBP eCLIP15.31■□□□□ 0.04
TROAP-213ENST00000550709 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
TROAP-213ENST00000550709 IBSPP21815 317 aaPredicted RBP15.31■□□□□ 0.04
TROAP-213ENST00000550709 GPC3P51654 580 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 DEFB103AP81534 67 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 FAM117BQ6P1L5 589 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 PRPF31Q8WWY3 499 aaKnown RBP15.31■□□□□ 0.04
TROAP-213ENST00000550709 NLRP4Q96MN2 994 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 PADI3Q9ULW8 664 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 STK24Q9Y6E0 443 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
TROAP-213ENST00000550709 SRGAP2CP0DJJ0 459 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 FGFR4P22455 802 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 PBX2P40425 430 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 UBA7P41226 1012 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
TROAP-213ENST00000550709 SPECC1Q5M775 1068 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 PADI6Q6TGC4 694 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 CABP7Q86V35 215 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 MYOCDQ8IZQ8 938 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 USP38Q8NB14 1042 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 PSPC1Q8WXF1 523 aaKnown RBP15.3■□□□□ 0.04
TROAP-213ENST00000550709 APBB2Q92870 758 aa15.3■□□□□ 0.04
TROAP-213ENST00000550709 CDK5RAP3Q96JB5 506 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms