RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 USP17L20D6RJB6 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TACC1O75410 805 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MMP10P09238 476 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MUTP22033 750 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CYP3A7P24462 503 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 RPL13P26373 211 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SHMT1P34896 483 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 GOLGA8FQ08AF8 430 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 GOLGA8DPQ0D2H9 430 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L24Q0WX57 530 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 TEAD4Q15561 434 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MEA1Q16626 185 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ABCB5Q2M3G0 1257 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CCDC40Q4G0X9 1142 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 HSP90B2PQ58FF3 399 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 FAM26FQ5R3K3 315 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 HYIQ5T013 277 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 ANKRD40Q6AI12 368 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 RAD9BQ6WBX8 426 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 FBXO11Q86XK2 927 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 C2CD5Q86YS7 1000 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CHURC1Q8WUH1 139 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 HNRNPLLQ8WVV9 542 aaKnown RBP4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SLF1Q9BQI6 1058 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MXD3Q9BW11 206 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 VPS33BQ9H267 617 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 CRISPLD1Q9H336 500 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SLC39A2Q9NP94 309 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 NDFIP2Q9NV92 336 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PANK4Q9NVE7 773 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 PNMA2Q9UL42 364 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MYO6Q9UM54 1294 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 GUCA1BQ9UMX6 200 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 SAR1BQ9Y6B6 198 aa4.81□□□□□ -1.64
CCDC59-204ENST00000550589 MYH6P13533 1939 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 COL4A1P02462 1669 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 TRIM49BA6NDI0 452 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 FAM196BA6NMK8 535 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 F5H6K3 240 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 TRAF5O00463 557 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 PSMD14O00487 310 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 CETN3O15182 167 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 CALUO43852 315 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 AKR1B10O60218 316 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 ECE2O60344 883 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 SSBP05455 408 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 BMP3P12645 472 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 EEF2P13639 858 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 HNRNPH3P31942 346 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 HSPA1LP34931 641 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 NOS2P35228 1153 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 STAT2P52630 851 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 KLRC3Q07444 240 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 GRB10Q13322 594 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 FZD5Q13467 585 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 CDC37Q16543 378 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 IFI16Q16666 785 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 SLC9C1Q4G0N8 1177 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 Q4G0T1 1027 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 TMEM119Q4V9L6 283 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 HERC4Q5GLZ8 1057 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 TAF3Q5VWG9 929 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 TATDN1Q6P1N9 297 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 KCTD1Q719H9 257 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 DYMQ7RTS9 669 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 HDXQ7Z353 690 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 VPS36Q86VN1 386 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 COL23A1Q86Y22 540 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 KIAA0825Q8IV33 1275 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 RTKN2Q8IZC4 609 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 GOLGA6L1Q8N7Z2 621 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 SYN2Q92777 582 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 SECISBP2LQ93073 1101 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 WDR24Q96S15 920 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 ANO3Q9BYT9 981 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 MMRN2Q9H8L6 949 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 MRPL44Q9H9J2 332 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 METTL14Q9HCE5 456 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 RNF14Q9UBS8 474 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 JRKLQ9Y4A0 524 aa4.8□□□□□ -1.64
CCDC59-204ENST00000550589 BZW2Q9Y6E2 419 aaKnown RBP4.8□□□□□ -1.64
CCDC59-204ENST00000550589 SSU72P8A0A1W2PR75 194 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 MYMKA6NI61 221 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 EML1O00423 815 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 SLC37A4O43826 429 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 TDP2O95551 362 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 CCDC172P0C7W6 258 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 PLA2G4BP0C869 781 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 FCER1AP12319 257 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 PRLRP16471 622 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 RPA1P27694 616 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 PAFAH1B1P43034 410 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 VAV2P52735 878 aa4.79□□□□□ -1.64
CCDC59-204ENST00000550589 ERVK-24P63145 666 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms