RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 TMEM266Q2M3C6 531 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 TIGD5Q53EQ6 642 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 GJA10Q969M2 543 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 C11orf84Q9BUA3 381 aaPredicted RBP27.17■■□□□ 1.94
USP44-205ENST00000549639 NIFKQ9BYG3 293 aaKnown RBP27.17■■□□□ 1.94
USP44-205ENST00000549639 CDHR5Q9HBB8 845 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 KCNMB3Q9NPA1 279 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 LRFN2Q9ULH4 789 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 ST3GAL5Q9UNP4 418 aa27.17■■□□□ 1.94
USP44-205ENST00000549639 DKC1O60832 514 aaKnown RBP eCLIP27.16■■□□□ 1.94
USP44-205ENST00000549639 VTNP04004 478 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 FDPSP14324 419 aaKnown RBP27.16■■□□□ 1.94
USP44-205ENST00000549639 CTNNB1P35222 781 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 SARSP49591 514 aaKnown RBP27.16■■□□□ 1.94
USP44-205ENST00000549639 TBC1D8BQ0IIM8 1120 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 PIK3AP1Q6ZUJ8 805 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 NECAB1Q8N987 351 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 TMEM40Q8WWA1 233 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 OSMRQ99650 979 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 PLVAPQ9BX97 442 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 LMAN2LQ9H0V9 348 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 RGS18Q9NS28 235 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 AKT3Q9Y243 479 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 NLRC5Q86WI3 1866 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 XIRP2A4UGR9 3374 aa27.16■■□□□ 1.94
USP44-205ENST00000549639 DENND3A2RUS2 1198 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 SLC37A4O43826 429 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 CCNT1O60563 726 aaKnown RBP27.15■■□□□ 1.94
USP44-205ENST00000549639 KRT2P35908 639 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 CLCN3P51790 818 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 PPP2R5CQ13362 524 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 TARBP2Q15633 366 aaKnown RBP27.15■■□□□ 1.94
USP44-205ENST00000549639 SLC24A5Q71RS6 500 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 ADAMTS19Q8TE59 1207 aa27.15■■□□□ 1.94
USP44-205ENST00000549639 SEC24BO95487 1268 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 LINC00271P0C7V0 271 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 BMP1P13497 986 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 NLRP11P59045 1033 aaKnown RBP27.14■■□□□ 1.94
USP44-205ENST00000549639 PSMC5P62195 406 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 TFF2Q03403 129 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 NAALADL2Q58DX5 795 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 NSUN7Q8NE18 718 aaKnown RBP27.14■■□□□ 1.94
USP44-205ENST00000549639 OXER1Q8TDS5 423 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 ADAM2Q99965 735 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 GJB4Q9NTQ9 266 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 SEPT9Q9UHD8 586 aaPredicted RBP27.14■■□□□ 1.94
USP44-205ENST00000549639 PCDHB7Q9Y5E2 793 aa27.14■■□□□ 1.94
USP44-205ENST00000549639 TNFRSF10AO00220 468 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 LARGE1O95461 756 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 TRIM29Q14134 588 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 FAM228AQ86W67 206 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 LRRC71Q8N4P6 559 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 ADAMTS10Q9H324 1103 aa27.13■■□□□ 1.93
USP44-205ENST00000549639 MARCH6O60337 910 aa27.12■■□□□ 1.93
USP44-205ENST00000549639 BAG4O95429 457 aaKnown RBP27.12■■□□□ 1.93
USP44-205ENST00000549639 EIF4BP23588 611 aaKnown RBP27.12■■□□□ 1.93
USP44-205ENST00000549639 DNM2P50570 870 aa27.12■■□□□ 1.93
USP44-205ENST00000549639 SLFN12Q8IYM2 578 aa27.12■■□□□ 1.93
USP44-205ENST00000549639 P2RX5Q93086 422 aa27.12■■□□□ 1.93
USP44-205ENST00000549639 UHRF1Q96T88 793 aaPredicted RBP27.12■■□□□ 1.93
USP44-205ENST00000549639 JPH2Q9BR39 696 aaPredicted RBP27.12■■□□□ 1.93
USP44-205ENST00000549639 VAV3Q9UKW4 847 aa27.12■■□□□ 1.93
USP44-205ENST00000549639 C9IYK1 514 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 STBD1O95210 358 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 QARSP47897 775 aaKnown RBP27.11■■□□□ 1.93
USP44-205ENST00000549639 GPC3P51654 580 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 EXOC8Q8IYI6 725 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 BANK1Q8NDB2 785 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 PPP1R16BQ96T49 567 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 ELAC1Q9H777 363 aaKnown RBP27.11■■□□□ 1.93
USP44-205ENST00000549639 LIMCH1Q9UPQ0 1083 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 PPME1Q9Y570 386 aa27.11■■□□□ 1.93
USP44-205ENST00000549639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.1■■□□□ 1.93
USP44-205ENST00000549639 IGKV6-21A0A0C4DH24 114 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 MGEA5O60502 916 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 MMP1P03956 469 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 P4HBP07237 508 aaKnown RBP27.1■■□□□ 1.93
USP44-205ENST00000549639 FAM189BP81408 668 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 MTERF2Q49AM1 385 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 TNFRSF25Q93038 417 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 NSUN3Q9H649 340 aaKnown RBP27.1■■□□□ 1.93
USP44-205ENST00000549639 UBE2ZQ9H832 354 aaPredicted RBP27.1■■□□□ 1.93
USP44-205ENST00000549639 TMEM161AQ9NX61 479 aa27.1■■□□□ 1.93
USP44-205ENST00000549639 MRPL42Q9Y6G3 142 aaKnown RBP27.1■■□□□ 1.93
USP44-205ENST00000549639 NCOR1O75376 2440 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 DDX11L8A8MPP1 907 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 NCK2O43639 380 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 ZSCAN20P17040 1043 aaPredicted RBP27.09■■□□□ 1.93
USP44-205ENST00000549639 KCNQ1P51787 676 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 NR5A1Q13285 461 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 DSC3Q14574 896 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 HAS1Q92839 578 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 SCLT1Q96NL6 688 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 CEP89Q96ST8 783 aa27.09■■□□□ 1.93
USP44-205ENST00000549639 EML1O00423 815 aa27.08■■□□□ 1.93
USP44-205ENST00000549639 MAFO75444 373 aaPredicted RBP27.08■■□□□ 1.93
USP44-205ENST00000549639 DARSP14868 501 aaKnown RBP27.08■■□□□ 1.93
USP44-205ENST00000549639 EPHA7Q15375 998 aa27.08■■□□□ 1.93
USP44-205ENST00000549639 EARS2Q5JPH6 523 aaKnown RBP27.08■■□□□ 1.93
USP44-205ENST00000549639 ATP6V0A4Q9HBG4 840 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms