RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 SEPT1Q8WYJ6 367 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 GPRASP2Q96D09 838 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 TCF25Q9BQ70 676 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 SMARCAD1Q9H4L7 1026 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 SENP2Q9HC62 589 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 ENTPD7Q9NQZ7 604 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 ERAP1Q9NZ08 941 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 IGSF9Q9P2J2 1179 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 DBR1Q9UK59 544 aaKnown RBP9.7□□□□□ -0.86
TROAP-208ENST00000548817 FRMPD4Q14CM0 1322 aa9.7□□□□□ -0.86
TROAP-208ENST00000548817 RRN3P2A6NIE6 340 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 M0QZ92 97 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 PRC1O43663 620 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 RFX1P22670 979 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 MCM5P33992 734 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 SARSP49591 514 aaKnown RBP9.69□□□□□ -0.86
TROAP-208ENST00000548817 MRPS6P82932 125 aaKnown RBP9.69□□□□□ -0.86
TROAP-208ENST00000548817 NONOQ15233 471 aaKnown RBP eCLIP9.69□□□□□ -0.86
TROAP-208ENST00000548817 SLC35G1Q2M3R5 365 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 IER5Q5VY09 327 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 PHLDB3Q6NSJ2 640 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 COLGALT1Q8NBJ5 622 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 IGDCC4Q8TDY8 1250 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 MTA3Q9BTC8 594 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 IL25Q9H293 177 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 AZI2Q9H6S1 392 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 AGO3Q9H9G7 860 aaKnown RBP9.69□□□□□ -0.86
TROAP-208ENST00000548817 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
TROAP-208ENST00000548817 TUBE1Q9UJT0 475 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 GTF3C3Q9Y5Q9 886 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 CDY2AQ9Y6F7 541 aa9.69□□□□□ -0.86
TROAP-208ENST00000548817 MBLAC1A4D2B0 266 aaPredicted RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 MAFGO15525 162 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 SGSM2O43147 1006 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 GSPT1P15170 499 aaKnown RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 MARK3P27448 753 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 CD52P31358 61 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 IGBP1P78318 339 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 MTMR1Q13613 665 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 SMC1AQ14683 1233 aaKnown RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 GRIK4Q16099 956 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 C1orf210Q8IVY1 113 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 MRPL43Q8N983 215 aaKnown RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 RIN2Q8WYP3 895 aaPredicted RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 TMEM87BQ96K49 555 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 MYL10Q9BUA6 226 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 PADI3Q9ULW8 664 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 PCDHB7Q9Y5E2 793 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
TROAP-208ENST00000548817 SLC12A7Q9Y666 1083 aa9.68□□□□□ -0.86
TROAP-208ENST00000548817 IGSF9BQ9UPX0 1349 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 DCDC2BA2VCK2 349 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 STK25O00506 426 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 MEIS2O14770 477 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 PDE4AP27815 886 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 GATMP50440 423 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 ANTXR2P58335 489 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 KRT17Q04695 432 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 PAK2Q13177 524 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 BMS1Q14692 1282 aaKnown RBP9.67□□□□□ -0.86
TROAP-208ENST00000548817 CCDC149Q6ZUS6 474 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 TMC7Q7Z402 723 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 MB21D2Q8IYB1 491 aaPredicted RBP9.67□□□□□ -0.86
TROAP-208ENST00000548817 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 DNAJB3Q8WWF6 145 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 SDF4Q9BRK5 362 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 FAM49AQ9H0Q0 323 aaPredicted RBP9.67□□□□□ -0.86
TROAP-208ENST00000548817 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 KCNK12Q9HB15 430 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 LY9Q9HBG7 655 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 C1orf112Q9NSG2 853 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 DLGAP2Q9P1A6 1054 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 FBXO4Q9UKT5 387 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 PCDHGA2Q9Y5H1 932 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 CACNA1IQ9P0X4 2223 aa9.67□□□□□ -0.86
TROAP-208ENST00000548817 KDM3AQ9Y4C1 1321 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 GSTTP1A0A1W2PQM5 241 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 TBKBP1A7MCY6 615 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 ATP9AO75110 1047 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 PLEKHA8P1O95397 391 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 ARP10275 920 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 KCNA2P16389 499 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 ZNF76P36508 570 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 LIFRP42702 1097 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 APOBRQ0VD83 1088 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 UBE2SQ16763 222 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 PPM1JQ5JR12 505 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 ODR4Q5SWX8 454 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 RARS2Q5T160 578 aaKnown RBP9.66□□□□□ -0.86
TROAP-208ENST00000548817 HEATR3Q7Z4Q2 680 aa9.66□□□□□ -0.86
TROAP-208ENST00000548817 SRBD1Q8N5C6 995 aaKnown RBP9.66□□□□□ -0.86
TROAP-208ENST00000548817 NETO1Q8TDF5 533 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms