RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 DNM2P50570 870 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 PSMC5P62195 406 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 GPM6BQ13491 265 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 KIZQ2M2Z5 673 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 B3GNT9Q6UX72 402 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 SLC24A5Q71RS6 500 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 RTN4RL1Q86UN2 441 aaPredicted RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 EXOC8Q8IYI6 725 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 SLFN12Q8IYM2 578 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 CMTR2Q8IYT2 770 aaKnown RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 CRIPAKQ8N1N5 446 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 NECAB1Q8N987 351 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 CLP1Q92989 425 aaKnown RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 ZNF689Q96CS4 500 aaPredicted RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 JPH2Q9BR39 696 aaPredicted RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 C11orf84Q9BUA3 381 aaPredicted RBP12.81□□□□□ -0.36
BEST3-209ENST00000548658 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 ERVK-5Q9HDB9 667 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 ST3GAL5Q9UNP4 418 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 PCDHB7Q9Y5E2 793 aa12.81□□□□□ -0.36
BEST3-209ENST00000548658 TRANK1O15050 2925 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 EVPLQ92817 2033 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 GPR32O75388 356 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 EIF4BP23588 611 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 SARSP49591 514 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 NAALADL2Q58DX5 795 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 KRT40Q6A162 431 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 GJA10Q969M2 543 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 OSMRQ99650 979 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 LMAN2LQ9H0V9 348 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 TMX1Q9H3N1 280 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 KCNMB3Q9NPA1 279 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 RGS18Q9NS28 235 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
BEST3-209ENST00000548658 PPME1Q9Y570 386 aa12.8□□□□□ -0.36
BEST3-209ENST00000548658 NCK2O43639 380 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 SLC37A4O43826 429 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 SEC24BO95487 1268 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 VTNP04004 478 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 ZSCAN20P17040 1043 aaPredicted RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 CTNNB1P35222 781 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 CLCN3P51790 818 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
BEST3-209ENST00000548658 TARBP2Q15633 366 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 UGCGQ16739 394 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 TMEM40Q8WWA1 233 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 LINC01599Q8WXQ3 324 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 P2RX5Q93086 422 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 ADAM2Q99965 735 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 ELAC1Q9H777 363 aaKnown RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
BEST3-209ENST00000548658 SEPT9Q9UHD8 586 aaPredicted RBP12.79□□□□□ -0.36
BEST3-209ENST00000548658 CUL9Q8IWT3 2517 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 VCANP13611 3396 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 MMP1P03956 469 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 BMP1P13497 986 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 LRRC71Q8N4P6 559 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 ZSCAN31Q96LW9 406 aaPredicted RBP12.78□□□□□ -0.36
BEST3-209ENST00000548658 SCLT1Q96NL6 688 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 INO80BQ9C086 356 aaPredicted RBP12.78□□□□□ -0.36
BEST3-209ENST00000548658 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 AAASQ9NRG9 546 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 LOXHD1Q8IVV2 1947 aa12.78□□□□□ -0.36
BEST3-209ENST00000548658 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 IGKV6-21A0A0C4DH24 114 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 C9IYK1 514 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 TNFRSF10AO00220 468 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 HOXA2O43364 376 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
BEST3-209ENST00000548658 LARGE1O95461 756 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 GPC3P51654 580 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 FAM189BP81408 668 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 TFF2Q03403 129 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 NR5A1Q13285 461 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 EPHA7Q15375 998 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 NLRP7Q8WX94 980 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 HAS1Q92839 578 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms