RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 DHX34Q14147 1143 aaKnown RBP25.08■■□□□ 1.6
NPAS3-206ENST00000548645 NAA25Q14CX7 972 aa25.08■■□□□ 1.6
NPAS3-206ENST00000548645 CLUL1Q15846 466 aa25.08■■□□□ 1.6
NPAS3-206ENST00000548645 DCAF17Q5H9S7 520 aaPredicted RBP25.08■■□□□ 1.6
NPAS3-206ENST00000548645 C6orf118Q5T5N4 469 aa25.08■■□□□ 1.6
NPAS3-206ENST00000548645 PPP1R18Q6NYC8 613 aa25.08■■□□□ 1.6
NPAS3-206ENST00000548645 PNMA8AQ86V59 439 aaPredicted RBP25.08■■□□□ 1.6
NPAS3-206ENST00000548645 CARD9Q9H257 536 aa25.08■■□□□ 1.6
NPAS3-206ENST00000548645 MYH14Q7Z406 1995 aaKnown RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 SLC26A4O43511 780 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 PPP1R12BO60237 982 aaPredicted RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 AGTP01019 485 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 ELAC2Q9BQ52 826 aaKnown RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 RASAL2Q9UJF2 1139 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 DRG2P55039 364 aaKnown RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 KLRC3Q07444 240 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 UBE2SQ16763 222 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 KNOP1Q1ED39 458 aaKnown RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 AZI2Q9H6S1 392 aa25.07■■□□□ 1.6
NPAS3-206ENST00000548645 METTL14Q9HCE5 456 aaKnown RBP25.07■■□□□ 1.6
NPAS3-206ENST00000548645 POTEB3A0JP26 581 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 POTECB2RU33 542 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 DDX3YO15523 660 aaKnown RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 PLTPP55058 493 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 ADCY2Q08462 1091 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 ACCSLQ4AC99 568 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 ASPRV1Q53RT3 343 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 KIAA1755Q5JYT7 1200 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 TCERG1LQ5VWI1 586 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 POTEBQ6S5H4 581 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 RFFLQ8WZ73 363 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 MXD3Q9BW11 206 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 SIX2Q9NPC8 291 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 TRPC6Q9Y210 931 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 CALUO43852 315 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 VIMP08670 466 aaKnown RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 TBC1D1Q86TI0 1168 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 MAB21L3Q8N8X9 362 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 SLC35G2Q8TBE7 412 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 RNF25Q96BH1 459 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 FAXDC2Q96IV6 333 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 STMN4Q9H169 189 aaPredicted RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 CNOT7Q9UIV1 285 aaKnown RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 NCANO14594 1321 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 DOT1LQ8TEK3 1739 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 NLRP3Q96P20 1036 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 NAP1L4Q99733 375 aaKnown RBP25.06■■□□□ 1.6
NPAS3-206ENST00000548645 OSGEPQ9NPF4 335 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 GCNT4Q9P109 453 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 PPP1R9AQ9ULJ8 1098 aa25.06■■□□□ 1.6
NPAS3-206ENST00000548645 AFF2P51816 1311 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 STAT1P42224 750 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 NOVP48745 357 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 BICDL1Q6ZP65 573 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 STAMBPL1Q96FJ0 436 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 PRMT1Q99873 361 aaKnown RBP25.05■■□□□ 1.6
NPAS3-206ENST00000548645 TRIM6Q9C030 488 aaPredicted RBP25.05■■□□□ 1.6
NPAS3-206ENST00000548645 AJAP1Q9UKB5 411 aaPredicted RBP25.05■■□□□ 1.6
NPAS3-206ENST00000548645 PDXKO00764 312 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 TMEM253P0C7T8 217 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 LMNB1P20700 586 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 SLC29A2Q14542 456 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 JAMLQ86YT9 394 aa25.05■■□□□ 1.6
NPAS3-206ENST00000548645 RTN2O75298 545 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 PAX7P23759 505 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 CLK2P49760 499 aaKnown RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 CASP5P51878 434 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 PLS1Q14651 629 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 FAM133BQ5BKY9 247 aaKnown RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 ARSHQ5FYA8 562 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 DCAF12L1Q5VU92 463 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 GLG1Q92896 1179 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 DHX36Q9H2U1 1008 aaKnown RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 BATF3Q9NR55 127 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 SNX24Q9Y343 169 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 CCDC189A1A4V9 331 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 SMIM23A6NLE4 172 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 IFI35P80217 286 aaPredicted RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 PPATQ06203 517 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 MYO1EQ12965 1108 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 ZNF268Q14587 947 aaPredicted RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 SLC30A5Q8TAD4 765 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 NSMCE1Q8WV22 266 aa25.04■■□□□ 1.6
NPAS3-206ENST00000548645 CTNNBL1Q8WYA6 563 aaPredicted RBP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 ZNF622Q969S3 477 aaKnown RBP eCLIP25.04■■□□□ 1.6
NPAS3-206ENST00000548645 PNMA6FA0A0J9YX94 578 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 KIAA0391O15091 583 aaKnown RBP25.03■■□□□ 1.6
NPAS3-206ENST00000548645 AKAP3O75969 853 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 RPL13P26373 211 aaKnown RBP25.03■■□□□ 1.6
NPAS3-206ENST00000548645 GBP1P32455 592 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 SLC12A3P55017 1021 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 MAPK7Q13164 816 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 CHADLQ6NUI6 762 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 ADAT2Q7Z6V5 191 aaKnown RBP25.03■■□□□ 1.6
NPAS3-206ENST00000548645 LNX1Q8TBB1 728 aaPredicted RBP25.03■■□□□ 1.6
NPAS3-206ENST00000548645 FBXO25Q8TCJ0 367 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 NEBLO76041 1014 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 ZDHHC24Q6UX98 284 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 BTNL9Q6UXG8 535 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms