RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 CAPN12Q6ZSI9 719 aa10.28□□□□□ -0.76
CALCOCO1-210ENST00000548263 CAVIN3Q969G5 261 aa10.28□□□□□ -0.76
CALCOCO1-210ENST00000548263 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
CALCOCO1-210ENST00000548263 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
CALCOCO1-210ENST00000548263 FLT1P17948 1338 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 THAP12O43422 761 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 GH2P01242 217 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 UCHL3P15374 230 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 KRT15P19012 456 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 ADCY8P40145 1251 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 PDIA5Q14554 519 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 GDAP1Q8TB36 358 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 PIGOQ8TEQ8 1089 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 AZI2Q9H6S1 392 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 DNAJC12Q9UKB3 198 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 USTQ9Y2C2 406 aa10.27□□□□□ -0.76
CALCOCO1-210ENST00000548263 AGPSO00116 658 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 ZNF263O14978 683 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 GAS8O95995 478 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 NR3C1P04150 777 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 LRRC14Q15048 493 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 CLUL1Q15846 466 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 GPATCH4Q5T3I0 446 aaKnown RBP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 SLC37A4O43826 429 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 HIP1RO75146 1068 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 RASA1P20936 1047 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 COPB2P35606 906 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 PMS2P54278 862 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 MYO1EQ12965 1108 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 TRIP13Q15645 432 aaPredicted RBP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 C6orf118Q5T5N4 469 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 METTL13Q8N6R0 699 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 PDGFDQ9GZP0 370 aaPredicted RBP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 COA1Q9GZY4 146 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 TMOD4Q9NZQ9 345 aa10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.27□□□□□ -0.77
CALCOCO1-210ENST00000548263 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 KCPQ6ZWJ8 1503 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 GAS7O60861 476 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ADRA2BP18089 450 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 GALCP54803 685 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ITIH3Q06033 890 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 MIIPQ5JXC2 388 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 TNFRSF25Q93038 417 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 THOC1Q96FV9 657 aaKnown RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 RUNDC3BQ96NL0 473 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 SLITRK6Q9H5Y7 841 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 IKBKGQ9Y6K9 419 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 EP400Q96L91 3159 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ZNF233A6NK53 670 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ATP2A1O14983 1001 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 POLD1P28340 1107 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 USP11P51784 963 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 MYL7Q01449 175 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ABCB5Q2M3G0 1257 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 SLC10A5Q5PT55 438 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 FBXO11Q86XK2 927 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 IL17RBQ9NRM6 502 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 CEP83Q9Y592 693 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ROBO1Q9Y6N7 1651 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ZNF131P52739 623 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 DRAP1Q14919 205 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 PPP2R5AQ15172 486 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 TRADDQ15628 312 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 UAP1Q16222 522 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 LRIG3Q6UXM1 1119 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 GLIS3Q8NEA6 775 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 ANO3Q9BYT9 981 aa10.26□□□□□ -0.77
CALCOCO1-210ENST00000548263 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 CYTH3O43739 400 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 SKOR1P84550 965 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 RCSD1Q6JBY9 416 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 RAPGEF5Q92565 580 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 KIFAP3Q92845 792 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 ARHGEF2Q92974 986 aaKnown RBP10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 TMBIM4Q9HC24 238 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 SIK3Q9Y2K2 1263 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 CHN1P15882 459 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 ADCY2Q08462 1091 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 CTTNQ14247 550 aaKnown RBP10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 SHROOM1Q2M3G4 852 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 HHATQ5VTY9 493 aa10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 ZNF746Q6NUN9 644 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO1-210ENST00000548263 PHLDB2Q86SQ0 1253 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms