RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 ANTXR2P58335 489 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 ACTR2P61160 394 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 SART3Q15020 963 aaKnown RBP14.58□□□□□ -0.08
SCAF11-208ENST00000546534 FAM43BQ6ZT52 329 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-208ENST00000546534 ERMP1Q7Z2K6 904 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 FRMD5Q7Z6J6 570 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
SCAF11-208ENST00000546534 KIAA0319LQ8IZA0 1049 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 IGDCC4Q8TDY8 1250 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 ATP6V0A4Q9HBG4 840 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 NGRNQ9NPE2 291 aaKnown RBP14.58□□□□□ -0.08
SCAF11-208ENST00000546534 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
SCAF11-208ENST00000546534 SEC63Q9UGP8 760 aaKnown RBP14.58□□□□□ -0.08
SCAF11-208ENST00000546534 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 FAM189BP81408 668 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 TPRNQ4KMQ1 711 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 NCOA7Q8NI08 942 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 CTCFLQ8NI51 663 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-208ENST00000546534 NKD2Q969F2 451 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-208ENST00000546534 MAP3K14Q99558 947 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 TMEM161AQ9NX61 479 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
SCAF11-208ENST00000546534 FNDC1Q4ZHG4 1894 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-208ENST00000546534 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 FAM186AA6NE01 2351 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 MYO15AQ9UKN7 3530 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 SPDYE3A6NKU9 549 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 E7EWF7 191 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 GPR182O15218 404 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 PLEKHA8P1O95397 391 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ASGR2P07307 311 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 KIF5BP33176 963 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 PBX3P40426 434 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ID4P47928 161 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 NUCB1Q02818 461 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 PTH1RQ03431 593 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ODR4Q5SWX8 454 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 KCNT2Q6UVM3 1135 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 LRRC55Q6ZSA7 311 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 TMC7Q7Z402 723 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ZNF654Q8IZM8 581 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ADSSL1Q8N142 457 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 SRBD1Q8N5C6 995 aaKnown RBP14.56□□□□□ -0.08
SCAF11-208ENST00000546534 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 CASP10Q92851 521 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 MXRA8Q9BRK3 442 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 SDF4Q9BRK5 362 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 TMEM117Q9H0C3 514 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ADAM7Q9H2U9 754 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 ELAC1Q9H777 363 aaKnown RBP14.56□□□□□ -0.08
SCAF11-208ENST00000546534 HCFC2Q9Y5Z7 792 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 NFASCO94856 1347 aa14.56□□□□□ -0.08
SCAF11-208ENST00000546534 hCG_1642624A0A1W2PR95 340 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 DDAH1O94760 285 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 ATG7O95352 703 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 WEE2P0C1S8 567 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 ARP10275 920 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 ITIH3Q06033 890 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 ITGB3BPQ13352 177 aaPredicted RBP14.55□□□□□ -0.08
SCAF11-208ENST00000546534 DSC3Q14574 896 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 KIZQ2M2Z5 673 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 CES5AQ6NT32 575 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 FAM228AQ86W67 206 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
SCAF11-208ENST00000546534 ZNF558Q96NG5 402 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 NECTIN4Q96NY8 510 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 CASD1Q96PB1 797 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 PPP1R16BQ96T49 567 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 LZTS2Q9BRK4 669 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 RNF19AQ9NV58 838 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 LIMD1Q9UGP4 676 aa14.55□□□□□ -0.08
SCAF11-208ENST00000546534 IGKV6D-21A0A0A0MT36 114 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 HBP1O60381 514 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 PPM1AP35813 382 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 SLC26A2P50443 739 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 CLCN5P51795 746 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 CRYBB1P53674 252 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-208ENST00000546534 KRT17Q04695 432 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-208ENST00000546534 MRPL43Q8N983 215 aaKnown RBP14.54□□□□□ -0.08
SCAF11-208ENST00000546534 OSMRQ99650 979 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 MFSD1Q9H3U5 465 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 RWDD1Q9H446 243 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-208ENST00000546534 LY9Q9HBG7 655 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 SPG21Q9NZD8 308 aa14.54□□□□□ -0.08
SCAF11-208ENST00000546534 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 CLASP2O75122 1294 aaKnown RBP14.53□□□□□ -0.08
SCAF11-208ENST00000546534 CCNE2O96020 404 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 IGHDP01880 384 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 MTHFRP42898 656 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 GNAQP50148 359 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 SMC1AQ14683 1233 aaKnown RBP14.53□□□□□ -0.08
SCAF11-208ENST00000546534 RARS2Q5T160 578 aaKnown RBP14.53□□□□□ -0.08
SCAF11-208ENST00000546534 KANK3Q6NY19 840 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
SCAF11-208ENST00000546534 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-208ENST00000546534 GVINP1Q7Z2Y8 2422 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms