RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
SSH1-203ENST00000546433 HMGCS2P54868 508 aa11.22□□□□□ -0.61
SSH1-203ENST00000546433 RCSD1Q6JBY9 416 aa11.22□□□□□ -0.61
SSH1-203ENST00000546433 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
SSH1-203ENST00000546433 ANAPC5Q9UJX4 755 aa11.22□□□□□ -0.61
SSH1-203ENST00000546433 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 KRT1P04264 644 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 CDK8P49336 464 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 IGBP1P78318 339 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 FAM133AQ8N9E0 248 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 OPTNQ96CV9 577 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 NCAPGQ9BPX3 1015 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 TYW5A2RUC4 315 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 MSCO60682 206 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 EIF4A3P38919 411 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 STAT3P40763 770 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 PDE1BQ01064 536 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 CUL1Q13616 776 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 LRRC41Q15345 812 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
SSH1-203ENST00000546433 PROM2Q8N271 834 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 MID2Q9UJV3 735 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 ADGRB1O14514 1584 aa11.21□□□□□ -0.61
SSH1-203ENST00000546433 CXCL11O14625 94 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 ARL4AP40617 200 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 JAK3P52333 1124 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 NAA35Q5VZE5 725 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 SMYD4Q8IYR2 804 aaPredicted RBP11.21□□□□□ -0.62
SSH1-203ENST00000546433 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 SCINQ9Y6U3 715 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 ENC1O14682 589 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 LDHAP00338 332 aaKnown RBP11.21□□□□□ -0.62
SSH1-203ENST00000546433 CPP00450 1065 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 CACNB3P54284 484 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 BIRC2Q13490 618 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 SESTD1Q86VW0 696 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 SLC12A6Q9UHW9 1150 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 ABCC6O95255 1503 aa11.21□□□□□ -0.62
SSH1-203ENST00000546433 MSH2P43246 934 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 CPT1AP50416 773 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 MTMR2Q13614 643 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 RBBP5Q15291 538 aaKnown RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 SNCBQ16143 134 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 UBE2TQ9NPD8 197 aaPredicted RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 FAM50BQ9Y247 325 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 PFASO15067 1338 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 INO80B-WBP1J3KQ70 363 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 SP3Q02447 781 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 PTPROQ16827 1216 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 CFAP61Q8NHU2 1237 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 CCDC188H7C350 402 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 SORBS3O60504 671 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 GFPT2O94808 682 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 RPLP2P05387 115 aaKnown RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 SLC16A2P36021 539 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 SLC38A10Q9HBR0 1119 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 MYPNQ86TC9 1320 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 POC1B-GALNT4F8VUJ3 575 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 TTI1O43156 1089 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 MFAP3LO75121 409 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 GPC4O75487 556 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 CAPN12Q6ZSI9 719 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 SPTLC3Q9NUV7 552 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 MOCS3O95396 460 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 HOXC6P09630 235 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 ELF1P32519 619 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 GBP7Q8N8V2 638 aaPredicted RBP11.2□□□□□ -0.62
SSH1-203ENST00000546433 OR6J1Q8NGC5 347 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 MSRAQ9UJ68 235 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 BAG5Q9UL15 447 aa11.2□□□□□ -0.62
SSH1-203ENST00000546433 KNDC1Q76NI1 1749 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 DENND3A2RUS2 1198 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 SOWAHDA6NJG2 315 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 CLIC2O15247 247 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
SSH1-203ENST00000546433 LARGE1O95461 756 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 TTC4O95801 387 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 PRPF38AQ8NAV1 312 aaKnown RBP11.19□□□□□ -0.62
SSH1-203ENST00000546433 TCP11Q8WWU5 503 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 KIAA1586Q9HCI6 787 aa11.19□□□□□ -0.62
SSH1-203ENST00000546433 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms