RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CLIP1P30622 1438 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 CNTLNQ9NXG0 1405 aa5.55□□□□□ -1.52
UBE4A-203ENST00000545354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 A6NCN8 305 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CENPBD1B2RD01 187 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 E7ENQ6 273 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 STX16-NPEPL1H3BU86 382 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PSMD9O00233 223 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KPNA5O15131 536 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ZW10O43264 779 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 NPPAP01160 153 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ENO2P09104 434 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 XRCC5P13010 732 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GLULP15104 373 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 EVI2BP34910 448 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GSDMDP57764 484 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 BPIFB4P59827 614 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 RBL2Q08999 1139 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 IDI1Q13907 227 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PRKG1Q13976 671 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 EPHA7Q15375 998 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TSC22D1Q15714 1073 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 HSP90AA5PQ58FG0 334 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PPP6R3Q5H9R7 873 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SPECC1LQ69YQ0 1117 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CYB5D1Q6P9G0 228 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 BORAQ6PGQ7 559 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 BEND4Q6ZU67 534 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CEP68Q76N32 757 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 BNIPLQ7Z465 357 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TBC1D21Q8IYX1 336 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 OR7G1Q8NGA0 311 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 FBXO30Q8TB52 745 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 COL26A1Q96A83 441 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 RMDN1Q96DB5 314 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CDRT15Q96T59 188 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TINF2Q9BSI4 451 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SHCBP1LQ9BZQ2 653 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GBA3Q9H227 469 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ADNPQ9H2P0 1102 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ARMC1Q9NVT9 282 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ANAPC5Q9UJX4 755 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 MTF2Q9Y483 593 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 AFG3L2Q9Y4W6 797 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ADAMTSL3P82987 1691 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TRAV6A0A075B6T7 132 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8QA0A0J9YX86 632 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 LOC105371267A0A1B0GV96 52 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ANO9A1A5B4 782 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8IPA6NC78 632 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8OA6NCC3 632 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 OR5K4A6NMS3 321 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KIF28PB7ZC32 967 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8NF8WBI6 632 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 HGSO14964 777 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PRPF3O43395 683 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ADCY3O60266 1144 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 LMNAP02545 664 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 P4HBP07237 508 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 MTHFD1P11586 935 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CKBP12277 381 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 HSPA6P17066 643 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ARF4P18085 180 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TBXAS1P24557 533 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ACAT1P24752 427 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PTGS2P35354 604 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KRT20P35900 424 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 AARSP49588 968 aaKnown RBP eCLIP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SARSP49591 514 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 SEC13P55735 322 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 C21orf58P58505 322 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KRT76Q01546 638 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8FQ08AF8 430 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GOLGA8DPQ0D2H9 430 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GALNT1Q10472 559 aaPredicted RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TBL3Q12788 808 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 TRIM32Q13049 653 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 NR1D2Q14995 579 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 MAP3K11Q16584 847 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 FUT11Q495W5 492 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ESCO1Q5FWF5 840 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 AADACL4Q5VUY2 407 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PRPF40BQ6NWY9 871 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 RANBP10Q6VN20 620 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 CCDC81Q6ZN84 652 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 RSRC2Q7L4I2 434 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KRT27Q7Z3Y8 459 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 MILR1Q7Z6M3 343 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 ADCK1Q86TW2 530 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 OSTM1Q86WC4 334 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 NKAIN4Q8IVV8 208 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 C12orf56Q8IXR9 622 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 PCSK9Q8NBP7 692 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 HERVK_113Q902F9 699 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 KCTD12Q96CX2 325 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 VPS50Q96JG6 964 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 MAELQ96JY0 434 aaKnown RBP5.54□□□□□ -1.52
UBE4A-203ENST00000545354 NELL2Q99435 816 aa5.54□□□□□ -1.52
UBE4A-203ENST00000545354 GLT8D2Q9H1C3 349 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms