RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 KIFAP3Q92845 792 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 DHTKD1Q96HY7 919 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-209ENST00000545305 SH2D3AQ9BRG2 576 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
SCARB1-209ENST00000545305 OLFML3Q9NRN5 406 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 TBC1D7Q9P0N9 293 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 LARSQ9P2J5 1176 aaKnown RBP15.25■□□□□ 0.03
SCARB1-209ENST00000545305 RWDD2AQ9UIY3 292 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
SCARB1-209ENST00000545305 ADCY6O43306 1168 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 HBP1O60381 514 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 HOXD8P13378 290 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-209ENST00000545305 CNGA1P29973 690 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 STX17P56962 302 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 CAP1Q01518 475 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 EMC2Q15006 297 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 PLCB4Q15147 1175 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 FAM178BQ8IXR5 827 aa15.24■□□□□ 0.03
SCARB1-209ENST00000545305 A6NJR5 290 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 DUSP11O75319 330 aaKnown RBP15.23■□□□□ 0.03
SCARB1-209ENST00000545305 GCNT3O95395 438 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 ZNF286BP0CG31 522 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 PLS3P13797 630 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
SCARB1-209ENST00000545305 ELNP15502 786 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 CCNE1P24864 410 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 TBC1D8BQ0IIM8 1120 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 MAPK7Q13164 816 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 SPATA1Q5VX52 437 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 SLC17A8Q8NDX2 589 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 TRPV1Q8NER1 839 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 P2RX5Q93086 422 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-209ENST00000545305 TSG101Q99816 390 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 JPH2Q9BR39 696 aaPredicted RBP15.23■□□□□ 0.03
SCARB1-209ENST00000545305 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 MYH11P35749 1972 aa15.23■□□□□ 0.03
SCARB1-209ENST00000545305 UBE4BO95155 1302 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 K7ENM7 598 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 EIF3DO15371 548 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 SEPT4O43236 478 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 GAS2O43903 313 aaKnown RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 MAPTP10636 758 aaKnown RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 RARBP10826 455 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 DMP1Q13316 513 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 ALCAMQ13740 583 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 NCAPHQ15003 741 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 LRRC41Q15345 812 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 TARBP2Q15633 366 aaKnown RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 ZNF484Q5JVG2 852 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 DAW1Q8N136 415 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 SLAIN1Q8ND83 568 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 IFT74Q96LB3 600 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
SCARB1-209ENST00000545305 C17orf75Q9HAS0 396 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 POLD4Q9HCU8 107 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 KCNG1Q9UIX4 513 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 COL1A2P08123 1366 aa15.22■□□□□ 0.03
SCARB1-209ENST00000545305 H3BRB1 525 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 SMTNP53814 917 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 RTP1P59025 263 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 TRIM32Q13049 653 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 FSCN1Q16658 493 aaKnown RBP15.21■□□□□ 0.03
SCARB1-209ENST00000545305 NOC3LQ8WTT2 800 aaKnown RBP15.21■□□□□ 0.03
SCARB1-209ENST00000545305 TCP11Q8WWU5 503 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 C16orf70Q9BSU1 422 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 POLR3FQ9H1D9 316 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-209ENST00000545305 TUT1Q9H6E5 874 aaKnown RBP15.21■□□□□ 0.03
SCARB1-209ENST00000545305 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 XPNPEP1Q9NQW7 623 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 PDLIM7Q9NR12 457 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 TRIM17Q9Y577 477 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
SCARB1-209ENST00000545305 H0YCG3 227 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 ZEB2O60315 1214 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 KPNA6O60684 536 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-209ENST00000545305 MYL3P08590 195 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 MYBP10242 640 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 NMT1P30419 496 aaKnown RBP15.2■□□□□ 0.02
SCARB1-209ENST00000545305 PEX3P56589 373 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 GJA9P57773 515 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 LRRC63Q05C16 580 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 PPP2R5AQ15172 486 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 EPM2AIP1Q7L775 607 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-209ENST00000545305 NELFCDQ8IXH7 590 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 GLIS3Q8NEA6 775 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 SCFD1Q8WVM8 642 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 CEP89Q96ST8 783 aa15.2■□□□□ 0.02
SCARB1-209ENST00000545305 KATNAL1Q9BW62 490 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms