RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MAP7Q14244 749 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 NAB2Q15742 525 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ZNF772Q68DY9 489 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 PHLDB2Q86SQ0 1253 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 ARHGAP24Q8N264 748 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 SPATA20Q8TB22 786 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 PSD3Q9NYI0 1048 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 HERC5Q9UII4 1024 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 PACSIN2Q9UNF0 486 aaPredicted RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 PTPN22Q9Y2R2 807 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 NOC2LQ9Y3T9 749 aaKnown RBP6.26□□□□□ -1.41
VPS50-220ENST00000544910 C4AP0C0L4 1744 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 C4BP0C0L5 1744 aa6.26□□□□□ -1.41
VPS50-220ENST00000544910 WTIPA6NIX2 430 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 KIF1CO43896 1103 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 MXI1P50539 228 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 NEDD9Q14511 834 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 Q4G0T1 1027 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 CCNI2Q6ZMN8 369 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 NOA1Q8NC60 698 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 PPP1R14CQ8TAE6 165 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 FERMT1Q9BQL6 677 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 LXNQ9BS40 222 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 ZNF341Q9BYN7 854 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS50-220ENST00000544910 ROBO3Q96MS0 1386 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 COL18A1P39060 1754 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 FGGP02679 453 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 PSAPP07602 524 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 GYS1P13807 737 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 ADCY8P40145 1251 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 NSFP46459 744 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 BPIFB4P59827 614 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 DHX9Q08211 1270 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 MTMR1Q13613 665 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 TMEM119Q4V9L6 283 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 MOXD1Q6UVY6 613 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 ARHGAP27Q6ZUM4 889 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 KCTD17Q8N5Z5 321 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 KIAA0895Q8NCT3 520 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 BBOF1Q8ND07 529 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 FUT8Q9BYC5 575 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 EHD4Q9H223 541 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 ODF2LQ9ULJ1 636 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 TIAM2Q8IVF5 1701 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 HNRNPDLO14979 420 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 ECEL1O95672 775 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 DRAP1Q14919 205 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 SNCBQ16143 134 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 WDR93Q6P2C0 686 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 DCUN1D2Q6PH85 259 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 MS4A14Q96JA4 679 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 CNOT10Q9H9A5 744 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 HIP1RO75146 1068 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 ENTPD3O75355 529 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 PLEKP08567 350 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 MAPK4P31152 587 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 RASSF2P50749 326 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 EIF3BP55884 814 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 PTK2Q05397 1052 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 EPHA7Q15375 998 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 BEND6Q5SZJ8 279 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 CATSPER3Q86XQ3 398 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 GMCL1P1Q8NEA9 526 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 MAGOHBQ96A72 148 aaKnown RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 TAF1DQ9H5J8 278 aaPredicted RBP6.25□□□□□ -1.41
VPS50-220ENST00000544910 KCND2Q9NZV8 630 aa6.25□□□□□ -1.41
VPS50-220ENST00000544910 CYTH3O43739 400 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 STAM2O75886 525 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 NDUFB10O96000 172 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ACTN1P12814 892 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 VAMP7P51809 220 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 TBC1D10BQ4KMP7 808 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 FAM160B1Q5W0V3 765 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ICE2Q659A1 982 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 APBB1IPQ7Z5R6 666 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 RAB3IPQ96QF0 476 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 POLR3CQ9BUI4 534 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 ATP8A1Q9Y2Q0 1164 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 ROBO1Q9Y6N7 1651 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 GOLGA8IPA6NC78 632 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 GOLGA8JA6NMD2 632 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 C21orf2O43822 256 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 PPP1R2P3Q6NXS1 205 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 NKX2-3Q8TAU0 364 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 MICAL1Q8TDZ2 1067 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 CEP170P1Q96L14 293 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 PNMA5Q96PV4 448 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 FMO2Q99518 471 aa6.24□□□□□ -1.41
VPS50-220ENST00000544910 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 TACO1Q9BSH4 297 aaKnown RBP6.24□□□□□ -1.41
VPS50-220ENST00000544910 TBC1D22BQ9NU19 505 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms