RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 A0A1W2PQ27 194 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 A0A1W2PQ64 194 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 A0A1W2PQD8 194 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 BTBD18B2RXH4 712 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 H3BRB1 525 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 GCOM1H8Y6P7 765 aaPredicted RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TREHO43280 583 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 SLC26A4O43511 780 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 STAM2O75886 525 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 LGALS2P05162 132 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 POLR2MP0CAP2 368 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 SMIM10L2AP0DMW4 78 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 SMIM10L2BP0DMW5 78 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 IL9P15248 144 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 PRPHP41219 470 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 UBE2HP62256 183 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 COL19A1Q14993 1142 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 SLC39A14Q15043 492 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 NONOQ15233 471 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 PTPROQ16827 1216 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 PUS10Q3MIT2 529 aaKnown RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TIGD5Q53EQ6 642 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 METTL3Q86U44 580 aaKnown RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 HOMER1Q86YM7 354 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 GJD3Q8N144 294 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 CMTR1Q8N1G2 835 aaKnown RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 NEK9Q8TD19 979 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 PTCD2Q8WV60 388 aaKnown RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 SEPT8Q92599 483 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 ATP6V0A1Q93050 837 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TOP1MTQ969P6 601 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 AIFM3Q96NN9 605 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 INPP4AQ96PE3 977 aaPredicted RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 RNPEPQ9H4A4 650 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TUT1Q9H6E5 874 aaKnown RBP7.42□□□□□ -1.22
CDCA3-209ENST00000544610 MLXIPQ9HAP2 919 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TCHHQ07283 1943 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 MYH15Q9Y2K3 1946 aa7.42□□□□□ -1.22
CDCA3-209ENST00000544610 TRIP12Q14669 1992 aaPredicted RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CYP3A7-CYP3A51PA0A087WV96 503 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CCDC194A0A1B0GVG4 234 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 SPATA31C2B4DYI2 1134 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 H3BNC9 293 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 TBX3O15119 743 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CYP3A4P08684 503 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CTSHP09668 335 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CYP3A7P24462 503 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 ICAM3P32942 547 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CIITAP33076 1130 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 ADAM17P78536 824 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 MRPS9P82933 396 aaKnown RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 NEDD9Q14511 834 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 TSR1Q2NL82 804 aaKnown RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 GNPTABQ3T906 1256 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 TMEM259Q4ZIN3 620 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 TMCO4Q5TGY1 634 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 ADALQ6DHV7 355 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PTCRAQ6ISU1 281 aaPredicted RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 TYW1BQ6NUM6 668 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 METTL7BQ6UX53 244 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 ELOA2Q8IYF1 753 aaPredicted RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 LINC00301Q8NCQ3 95 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 CRYGNQ8WXF5 182 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 APBB2Q92870 758 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PABPC5Q96DU9 382 aaKnown RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 SPATA32Q96LK8 384 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 YME1L1Q96TA2 773 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 GPR20Q99678 358 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PYM1Q9BRP8 204 aaKnown RBP7.41□□□□□ -1.22
CDCA3-209ENST00000544610 OSBPL7Q9BZF2 842 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 BCAS3Q9H6U6 928 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
CDCA3-209ENST00000544610 MICAL3Q7RTP6 2002 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 FAM237AA0A1B0GTK4 181 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 H3BQ06 376 aaPredicted RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 NOP56O00567 594 aaKnown RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 MEIS2O14770 477 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 FIBPO43427 364 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 GNAT1P11488 350 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 SREBF1P36956 1147 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 DNM1Q05193 864 aaKnown RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 SEMA3FQ13275 785 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 GPM6BQ13491 265 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 PTPAQ15257 358 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 KLHL40Q2TBA0 621 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 TCEAL5Q5H9L2 206 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 FAM26DQ5JW98 314 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 CYFIP1Q7L576 1253 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 NIPA1Q7RTP0 329 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 NEK8Q86SG6 692 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 RPAINQ86UA6 219 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 FERMT3Q86UX7 667 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms